Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 438 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  151 bits (381), Expect = 5e-41
 Identities = 138/478 (28%), Positives = 204/478 (42%), Gaps = 54/478 (11%)

Query: 2   KISTLALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSADNRSGT 61
           ++S +AL I +A  A     D              GF+EDSH  I++R  Y S D ++G 
Sbjct: 5   RMSLIALGILSASTAMANDQDQ-----------SKGFIEDSHLNIAARNAYISRDYKNG- 52

Query: 62  NNDLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDGHTAGAGL----SGNGNS 117
             D  E         +SGFTQGT+G+G DV+   A+RLDGG G     G+     GNG +
Sbjct: 53  KQDKAEWGQGFIGKLESGFTQGTVGVGVDVIGQYAIRLDGGKGRAGAGGIDFFKQGNGTT 112

Query: 118 FFPTKNNGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGI 177
                NN         +    VKFR+S T L  G    P +P+L  ++SR+  +T+ G  
Sbjct: 113 NPDGSNNPGSAPHDLAKGGAAVKFRVSNTVLKYGDQF-PAVPVLQYDNSRLLSETYTGTS 171

Query: 178 LTSNDIPNVTFTGGELNRAEGRASSNSTGLSVAGGTRDSDSFKFGGVDYKPFGSSDNVIA 237
           + S +I  +    G   + E R S   T           DS +   +DY   G S     
Sbjct: 172 IVSKEIAGLQLDAGHFTK-EARKSMEGT-----------DSGRLKSIDY--IGGSYK-FT 216

Query: 238 KNLTLQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNN 297
           ++L+   Y + +QD  K+ Y  + +VL L   QS   D   + +  D       +   N 
Sbjct: 217 ESLSAALYASDMQDVLKKQYVNVNYVLALPEKQSLTFDFNGYKTKLD-----RSFALENQ 271

Query: 298 GGYAKHANEVDNKTYSAAFTYQLGGSSLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGS 357
               K A+  DNK +S   T+ +G  S  + H     D G+++   G   +    G GG+
Sbjct: 272 ----KDADARDNKIWSLGATWAVGPHSFTVAHQRSTGDTGYLY---GGYRNAGGIGDGGN 324

Query: 358 DFYLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQK 416
              L  ++    F+   E+     Y  DF  + VPGL  +VAY+ G +I      G D  
Sbjct: 325 TI-LLANSYWSDFNGKDERSWQLGYGIDFATFGVPGLTYNVAYVRGTNIDDGTNRG-DGT 382

Query: 417 ENEADFRLDYVVQAGPLKGFGTTFRTGTYHGKNTGTADQ-----DQTRLIFNYTYAIF 469
           E E   +  YVVQ+GP K      R       N   ADQ     ++ RL  +Y   +F
Sbjct: 383 EREIWNQFKYVVQSGPAKDLSLRARASWLRVSN--NADQYNVGGNEIRLFADYPINVF 438