Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 450 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  363 bits (933), Expect = e-105
 Identities = 211/477 (44%), Positives = 276/477 (57%), Gaps = 41/477 (8%)

Query: 2   KISTLALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSADNRSGT 61
           K+  +  ++    LAQQ +A               GFL+DS A+ISSRT+YY  D RS  
Sbjct: 6   KVKRILAALACGTLAQQGYA--------------VGFLDDSKASISSRTLYYDGDQRSTG 51

Query: 62  NNDLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDG-HTAGAGLSGNGNSFFP 120
             D R+  T LR D++SG+T+G +GLG D+ A     L GG   H A        N+  P
Sbjct: 52  GADQRQTLTGLRLDFQSGYTEGVVGLGLDLQALAGFTLSGGTSPHNASTV-----NTVSP 106

Query: 121 TKNNGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTS 180
              +G+ P D++ R  GN +F+ S+TEL  G  L   LP+L+SND R+ P +F G  LTS
Sbjct: 107 VTTDGS-PVDNWSRIGGNARFKYSKTELKAGNALTFNLPVLISNDGRLLPASFQGAALTS 165

Query: 181 NDIPNVTFTGGELNRAEGRASSNSTGLSVAGGTRDSDSFKFGGVDYKPFGSSDNVIAKNL 240
           N+  N+T  GG LNRA GRASSN  G+S  GG + SD F F G D+         + KNL
Sbjct: 166 NEFENLTLNGGFLNRAIGRASSNWAGIS-GGGAKGSDGFAFAGGDWN--------VRKNL 216

Query: 241 TLQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNG-ESGYQFNNNGG 299
            LQYYYA L+D+Y QN+ GL+H   +G  QS  TDLRYF S SDGKNG +S Y   N  G
Sbjct: 217 KLQYYYANLEDYYSQNFLGLIHSFDMGVGQSLTTDLRYFKSDSDGKNGTDSRYALRN--G 274

Query: 300 YAKHANEVDNKTYSAAFTYQLGGSSLMLGHIGVGDDGGFVWVNQGSLADPHA--QGAGG- 356
           Y ++  ++DN T+S AFTY+ GG +L LGH  V D  GF  VN  ++ D     +G GG 
Sbjct: 275 YNEN-GKIDNTTWSLAFTYKAGGHALTLGHQQVSDKSGFATVNSSNVVDGRGRPEGEGGV 333

Query: 357 SDFYLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQ 415
              YL+TD +V  F+RAGE   FG YSYDF A  VPGLKA   Y+ G+DI+        +
Sbjct: 334 QSLYLYTDVMVNSFTRAGENSTFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNTTTGR 393

Query: 416 -KENEADFRLDYVVQAGPLKGFGTTFRTGTYHG--KNTGTADQDQTRLIFNYTYAIF 469
             E E+D+RLDYV+Q+G  KG G T R G +     ++   DQDQ R   NYTYA++
Sbjct: 394 YNEWESDYRLDYVLQSGTFKGLGFTLRKGVFRTGLPDSTLKDQDQVRFFVNYTYALW 450