Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  178 bits (451), Expect = 4e-49
 Identities = 140/478 (29%), Positives = 227/478 (47%), Gaps = 76/478 (15%)

Query: 6   LALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSAD----NRSGT 61
           LA    AA L  +A A++            +GF+E + A + +R  ++S D      + T
Sbjct: 15  LAGGCIAAALCAEATAEE------------AGFIEGARATLQARNYFFSRDYADIKGAST 62

Query: 62  NNDLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPT 121
            +  +E A     +  SG+TQGT+G+G DV      +LD    H A +GL        P+
Sbjct: 63  QSRTQEWAQGFILNASSGYTQGTLGVGVDVTGLLGFKLDSSPEH-ARSGL-------LPS 114

Query: 122 KNNGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSN 181
            ++G + AD + R    +KF++SQTEL VG  L P LP+L+ +D R+ P T+ G +L S 
Sbjct: 115 LDSG-KSADEYSRLGAAIKFKVSQTELKVGE-LMPNLPVLLFSDLRLLPPTYQGAMLESR 172

Query: 182 DIPNVTFTGGELNRAEGRASSNSTGLSVAGGTR---------DSDSFKFGGVDYKPFGSS 232
           +   +T + G+      R SSNS  +                 SD F + G DY     +
Sbjct: 173 EFAGLTLSAGQFRSTSLRDSSNSQKMYALVNDPINPARLARFTSDRFNYVGADY---AFN 229

Query: 233 DNVIAKNLTLQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNGESGY 292
           DN      ++  + AQL+D Y+Q ++   H  PLG+  +   +  YFD+  DG       
Sbjct: 230 DN----RTSVGVWQAQLEDIYQQRFYSFKHAEPLGS-WTLGVNAGYFDAREDG------- 277

Query: 293 QFNNNGGYAKHANEVDNKTYSAAFTYQLGGSSLMLGHIGVGDDGGFVWVNQGSLADPHAQ 352
                   +K A + DN    + F+ + GG +  +G+  +G D GF+ V  G+  +P   
Sbjct: 278 --------SKVAGDYDNHALFSLFSAKTGGHTFYVGYQQIGGDDGFIQV--GANTNP--- 324

Query: 353 GAGGSDFYLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIKSKVAG 411
                   +       +FS  GE+    ++ Y+F A  +PGL +++ Y+ GRD+++ +  
Sbjct: 325 --------MGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYVKGRDVETGL-- 374

Query: 412 GPDQKENEADFRLDYVVQAGPLKGFGTTFRTGTYHGKNTGTADQDQTRLIFNYTYAIF 469
           G + ++ E D  L YVVQ+GPL G G   R      ++    D D+ RLI +YT  +F
Sbjct: 375 GFEGRDRERDLDLAYVVQSGPLAGLG--IRVRNVMARSNYRTDIDENRLILSYTIKVF 430