Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  171 bits (434), Expect = 3e-47
 Identities = 146/464 (31%), Positives = 210/464 (45%), Gaps = 61/464 (13%)

Query: 5   TLALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSADNRS--GTN 62
           TLA S+ A  LA       FGLG L       GFLED+   ++ R  Y++ D R      
Sbjct: 7   TLARSVLAVSLA-------FGLG-LPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAK 58

Query: 63  NDLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPTK 122
             + E A    F + SG+T G IG G D +A   ++LD G G +        G+   P  
Sbjct: 59  GKVEEWAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTS--------GSELLPVH 110

Query: 123 NNGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSND 182
           ++G   AD +GRA    K R+S TEL VG  L P +P+L  +D R+ PQTF G +L S +
Sbjct: 111 DDG-RAADDYGRAGLAAKLRMSATELKVGE-LLPDIPLLRYDDGRLLPQTFRGAMLDSRE 168

Query: 183 IPNVTFTGGELNRAEGRASSNSTGLSV-AGGTRDSDSFKFGGVDYKPFGSSDNVIAKNLT 241
           I  ++   G+      R SS+   LS  A     SD F + G +Y+ F     +I     
Sbjct: 169 IEGLSLQAGQYREVSLRHSSDMQDLSAWAAPGVTSDGFNYAGAEYR-FNQQRTLIGA--- 224

Query: 242 LQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYA 301
              +++QL+D Y+Q+YF L+H   +G + +   +L YF    DG+               
Sbjct: 225 ---WHSQLEDIYQQSYFNLLHSQRVG-EWTLGANLGYFIDRDDGQ--------------- 265

Query: 302 KHANEVDNKTYSAAFTYQLGGSSLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDFYL 361
               ++ ++T  A  +    G +L LG   V  D  ++ V             G S   L
Sbjct: 266 ARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSV------------YGSSGRTL 313

Query: 362 FTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQKENEA 420
             D   G FS A E+    +Y Y+F A  VPGL A V Y  G    +  A G + KE E 
Sbjct: 314 GNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRY--GHGENATTAAGSNGKEWER 371

Query: 421 DFRLDYVVQAGPLKGFGTTFRTGTYHGKNTGTADQDQTRLIFNY 464
           D  ++Y  Q+G LK         T   + +  +D DQTRLI +Y
Sbjct: 372 DAEVNYTFQSGALKNLNIRLNNAT--NRRSFNSDLDQTRLIVSY 413