Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  162 bits (410), Expect = 2e-44
 Identities = 128/445 (28%), Positives = 196/445 (44%), Gaps = 64/445 (14%)

Query: 37  GFLEDSHAAISSRTMYYSADNRS--GTNNDLR--EAATALRFDYKSGFTQGTIGLGFDVM 92
           GF EDS A +S+R  Y+S D     G N   +  E A     D+KSG+T G +G G D +
Sbjct: 24  GFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILDFKSGYTPGPVGFGVDAL 83

Query: 93  AFGALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQTELHVGG 152
               ++LD     T             P   +G   AD + R A   K R+S+TEL  G 
Sbjct: 84  GLLGIKLDSSPDRT--------NTGLLPVHGDG-RAADEYSRLAPTFKARLSKTELRAGE 134

Query: 153 GLAPVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSNSTGLSVAGG 212
            L P LP+L  +D R+ P T+ G  L+S++I  +T   G L     R       ++   G
Sbjct: 135 -LQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNEGGDGKMNAMLG 193

Query: 213 -----TRDSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVHVLPLG 267
                  +SD+F + G DY          A   ++  +Y QL+D Y+Q + GL H  P+G
Sbjct: 194 HVPMRQAESDAFNYVGGDYA-------FNANQSSVSLWYGQLEDIYQQGFVGLKHSKPVG 246

Query: 268 NDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGSSLML 327
            D     +L YF +   G                     +DN+ + + FT + GG S   
Sbjct: 247 -DWVLSANLGYFTAREQGD---------------ALLGNIDNQAFFSLFTARHGGHSFHA 290

Query: 328 GHIGVGDDGGF--VWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYSYD 385
           G+ G+  D  F  V+ N   L +               +    +F+   E+    +Y Y+
Sbjct: 291 GYQGIYGDSPFPRVFANISPLGN---------------EVPTYEFAYTDERSYQVRYDYN 335

Query: 386 FKAY-VPGLKASVAYLDGRDIKSKVAGGPDQKENEADFRLDYVVQAGPLKGFGTTFRTGT 444
           F A  VPGL A+V Y+ G ++ + +  G + ++ E D  + Y VQ+G LKG G   R   
Sbjct: 336 FAAMGVPGLTATVRYITGNNVDTGL--GYEGRDRERDLDIGYAVQSGALKGLGIRVRNAM 393

Query: 445 YHGKNTGTADQDQTRLIFNYTYAIF 469
              ++   +D D+ RL   YT+ +F
Sbjct: 394 --ARSNYRSDIDENRLTLVYTWQLF 416