Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  174 bits (441), Expect = 5e-48
 Identities = 137/436 (31%), Positives = 209/436 (47%), Gaps = 57/436 (13%)

Query: 37  GFLEDSHAAISSRTMYYSAD-NRSGTNNDLREAATALRFDYKSGFTQGTIGLGFDVMAFG 95
           GF++D+ A+++ R  Y + D   + +     E   +  FD+KSG+T G +G G DV+   
Sbjct: 27  GFVDDAKASLTLRNFYMNRDYTGTASQGKAEEWTQSFIFDFKSGYTPGVVGFGVDVLGLY 86

Query: 96  ALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQTELHVGGGLA 155
           +++LDGG G TAG  L        P  ++G  PAD FGR A   K R+S+TEL V G  +
Sbjct: 87  SIKLDGGKG-TAGTQL-------LPVHDDG-RPADDFGRTALAGKMRVSRTELKV-GEWS 136

Query: 156 PVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSNSTGLSVAGGTR- 214
           P LPIL ++D R  PQT  G  +TSN++  ++  GG+  +   R  ++   +S+   T  
Sbjct: 137 PTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQDMSLFTRTAF 196

Query: 215 DSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKT 274
            SD F F G +Y+ F     ++        +YAQL+D Y+Q YF + H  PLGN      
Sbjct: 197 TSDRFNFAGGEYR-FNQERTLVGA------WYAQLEDIYQQRYFQVQHQQPLGN-WVLGA 248

Query: 275 DLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGSSLMLGHIGV-G 333
           +L YF    DG                  A E++N+T S  F+ +LGG++  +G   V G
Sbjct: 249 NLGYFWGKDDG---------------GAKAGELNNRTASGLFSAKLGGNTFYVGLQKVMG 293

Query: 334 DDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPG 392
           DD  F              GA G    L  DA    +  A E+    ++ ++F    +PG
Sbjct: 294 DDEWF-----------RVNGASGGT--LANDAFGSSYESARERSWQVRHDFNFVVLGIPG 340

Query: 393 LKASVAYLDGRDIKSKVAGGPDQKENEADFRLDYVVQAGPLKGFGTTFRTGTYHGKNTGT 452
           L     Y+ G ++ +    G   +E+E    L YVVQ+GP K     +R  +       T
Sbjct: 341 LTLMNRYIHGYNVHNASTQG---RESE----LAYVVQSGPFKALNLKWRNSSQRRDWGST 393

Query: 453 ADQDQTRLIFNYTYAI 468
              D+ RLI +Y  ++
Sbjct: 394 NSFDENRLIVSYPLSL 409