Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 2e-62
 Identities = 155/448 (34%), Positives = 215/448 (47%), Gaps = 64/448 (14%)

Query: 34  GHSGFLEDSHAAISSRTMYYSADNRSGTNNDLREAATA----------LRFDYKSGFTQG 83
           G +GF+EDS   +  R +Y++ + R       R AATA             DY+SGFTQG
Sbjct: 22  GAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQG 81

Query: 84  TIGLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRI 143
           T+GLG D M    +RLD G G +        G    P  ++G   AD F  A    K R+
Sbjct: 82  TLGLGVDAMGLLGVRLDSGRGRS--------GTGLLPVHDDG-RAADEFASAGITAKARL 132

Query: 144 SQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSN 203
             T +   G L P  P+LV ND+R+ PQT+ G  LTS DI N+T T G L+R + R SS+
Sbjct: 133 GSTVVK-HGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSD 191

Query: 204 STGLSVAG-GTRDSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVH 262
           STGL + G G   S  F F G DY         ++K L L Y++ +L+ FY+Q++ GLVH
Sbjct: 192 STGLYLDGYGGPASGDFSFAGADY--------AVSKQLRLSYFHGELEHFYRQDFAGLVH 243

Query: 263 VLPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGG 322
            LPLG      TDLRYF S   G                 +   +DN  +S   +Y   G
Sbjct: 244 DLPLGGG-VLTTDLRYFKSRDSG---------------TAYGGGIDNDMFSGQLSYAHSG 287

Query: 323 SSLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQY 382
            ++  G+  +  + G  +++             G+  Y F++  +G+F    E+     Y
Sbjct: 288 HTVGAGYQVLDGEAGLPYIS-------------GATVYSFSNVGIGKFIEEEEKTWMASY 334

Query: 383 SYDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQKENEADFRLDYVVQAGPLKGFGTTFR 441
           +Y+F A  VPGL     YL G + +S   GG   KE E D  + YVVQ GPLKG G   R
Sbjct: 335 AYNFAAAGVPGLTFMTRYLSGDNGRS---GGEGIKEWERDAEIAYVVQGGPLKGLGVKLR 391

Query: 442 TGTYHGKNTGTADQDQTRLIFNYTYAIF 469
              Y  ++     +D  RL   Y  AI+
Sbjct: 392 NYVY--RSDFARGRDSNRLYLTYDIAIW 417