Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 2e-57
 Identities = 142/444 (31%), Positives = 218/444 (49%), Gaps = 61/444 (13%)

Query: 36  SGFLEDSHAAISSRTMYYSADNRSGTN---NDLREAATALRFDYKSGFTQGTIGLGFDVM 92
           + F EDS A   +R MY++ D R GT+   +   E A     +++SG+T GT+G G D +
Sbjct: 37  AAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFILNFESGYTDGTVGFGLDAL 96

Query: 93  AFGALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQTELHVGG 152
               ++LD     T         +   PT ++G + AD + +     K +ISQTEL +G 
Sbjct: 97  GMLGIKLDSSPDRT--------DSGLLPTHDDG-KAADEYSKLGLTGKVKISQTELKIGT 147

Query: 153 GLAPVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSNSTGLSV--- 209
            L P LP L  ND R+ PQTF+GG+LTS +I  +TFTGG +++A+ R  +N   L++   
Sbjct: 148 -LIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTNWEDLALNNK 206

Query: 210 ---AGGTRDSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVHVLPL 266
               GGT  +D+   GG+DY+            +T  Y++AQL D Y+Q++ G+V   P 
Sbjct: 207 NGRFGGTFSADNLALGGLDYQ--------FTDRITGSYHFAQLDDIYRQHFIGMVATQPW 258

Query: 267 GNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGSSLM 326
           G   +   DLR   S   G               A  A  +DN T +   +Y LGG  + 
Sbjct: 259 G-PGTLGADLRLAMSDDAG---------------AAKAGNIDNTTVNGMLSYALGGHKVS 302

Query: 327 LGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYSYDF 386
                +  +  F +V+             G+D YL     +  F+ A E+    +Y Y+F
Sbjct: 303 AAWQQLSGESAFPYVD-------------GADPYLVNFVQINDFAGADERSWQARYDYNF 349

Query: 387 KAY-VPGLKASVAYLDGRDIKSKVAGGPDQKENEADFRLDYVVQAGPLKGFGTTFRTGTY 445
            A  VPGL     Y+ G ++ S+ AGG + KE E +  L YVVQ+GPLK      R  T+
Sbjct: 350 AALGVPGLTFMTRYISGDNV-SRAAGG-EGKEWERNTELKYVVQSGPLKNVAVRLRNATF 407

Query: 446 HGKNTGTADQDQTRLIFNYTYAIF 469
             ++    D D+ RL+ +Y+ A++
Sbjct: 408 --RSNFARDADEVRLLVSYSVALW 429