Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  174 bits (440), Expect = 7e-48
 Identities = 143/463 (30%), Positives = 210/463 (45%), Gaps = 54/463 (11%)

Query: 6   LALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSAD--NRSGTNN 63
           +++S+ A  L     A    L +     G  GF+ED+ A ++ R  Y + +  + +    
Sbjct: 1   MSISLPARQLLPGLLAMSCALPAFAANEG--GFIEDAKATLNLRNFYINRNFVDPAHPQG 58

Query: 64  DLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPTKN 123
              E   +   D +SGFTQGT+G G DV+   +++LDGG G T             P   
Sbjct: 59  KAEEWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTT--------NTHLLPVHG 110

Query: 124 NGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSNDI 183
           +G  PAD FGR    +K ++S+TEL VG  + PVLPIL S+D R  PQTF GG LTS +I
Sbjct: 111 DG-RPADDFGRLGVALKAKLSETELKVGEWM-PVLPILRSDDGRSLPQTFRGGQLTSREI 168

Query: 184 PNVTFTGGELNRAEGRASSNSTGLSVAG-GTRDSDSFKFGGVDYKPFGSSDNVIAKNLTL 242
             +T   G+      R  ++   +S+ G     SD F FGG +Y           K   +
Sbjct: 169 AGLTLYAGQFRGNSPRNDASMEDMSLNGKAAFTSDRFNFGGGEY-------TFNDKRTMI 221

Query: 243 QYYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAK 302
             + AQL+D Y+Q Y  L H  PLG D +   +L YF    DG               A+
Sbjct: 222 GLWDAQLKDIYRQQYLNLTHSQPLG-DWTLGANLGYFIGKEDG---------------AE 265

Query: 303 HANEVDNKTYSAAFTYQLGGSSLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDFYLF 362
            A ++DN+T SA  + +  G +  +G   V  D  ++ VN            G S   L 
Sbjct: 266 RAGKLDNRTASALLSARYQGHTFYVGLQKVSGDDAWMRVN------------GTSGGTLA 313

Query: 363 TDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQKENEAD 421
            D+    F  A E+    ++ ++F    VPGL     Y+ G ++   V    D KE   +
Sbjct: 314 NDSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRYIKGDNV--TVGSVDDGKEWARE 371

Query: 422 FRLDYVVQAGPLKGFGTTFRTGTYHGKNTGTADQDQTRLIFNY 464
             L YVVQ+G  K     +R  T   ++  T   D+ RLI +Y
Sbjct: 372 TELAYVVQSGSFKDLSLKWRNSTMR-RDFSTNAFDENRLIVSY 413