Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  188 bits (477), Expect = 3e-52
 Identities = 143/436 (32%), Positives = 207/436 (47%), Gaps = 54/436 (12%)

Query: 36  SGFLEDSHAAISSRTMYYSAD--NRSGTNNDLREAATALRFDYKSGFTQGTIGLGFDVMA 93
           +GF+ED  A +  R  Y + +  N S   +   E   +   D +SGFT+G IG G DV+ 
Sbjct: 27  AGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFTEGPIGFGVDVLG 86

Query: 94  FGALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQTELHVGGG 153
             +++LDGG G          G +  P  ++G  PAD +GR A   K RIS+TEL +G  
Sbjct: 87  LWSVKLDGGGGTY--------GTALLPRHDDG-RPADDYGRLAVAGKARISKTELKIGEW 137

Query: 154 LAPVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASSNSTGLSVAGGT 213
           + PVLPIL S+D R  PQTF GG +TSN+I  +T  GG+      R  ++   +S  GG 
Sbjct: 138 M-PVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDMSYGGGV 196

Query: 214 RDSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVHVLPLGNDQSFK 273
             SD F F G +YK F      +        + A L+D Y+Q Y  L H  P+G D +  
Sbjct: 197 --SDRFNFVGGEYK-FNQDRTQVG------LWNAVLKDVYQQQYLQLSHSQPVG-DWTLG 246

Query: 274 TDLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGSSLMLGHIGVG 333
            +L YF    DG               ++ A ++DNKTYS  F+ + GGS+  +G   V 
Sbjct: 247 ANLGYFHGDEDG---------------SERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVD 291

Query: 334 DDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPG 392
            D    W+             G S   L  D+    F  A E+    ++ ++F    VPG
Sbjct: 292 GD---TWMRVN----------GTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPG 338

Query: 393 LKASVAYLDGRDIKSKVAGGPDQKENEADFRLDYVVQAGPLKGFGTTFRTGTYHGKNTGT 452
           L     Y+ GRD+ S   G  D KE   +  L YV+Q+G  K     +R  +   ++   
Sbjct: 339 LTLMNRYISGRDVHS--GGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIR-RDYSN 395

Query: 453 ADQDQTRLIFNYTYAI 468
            + D+ RLIFNY  ++
Sbjct: 396 NEFDENRLIFNYPLSL 411