Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  476 bits (1226), Expect = e-139
 Identities = 250/468 (53%), Positives = 317/468 (67%), Gaps = 35/468 (7%)

Query: 4   STLALSITAAVLAQQAFADDFGLGSLGTGNGHSGFLEDSHAAISSRTMYYSADNRSGTNN 63
           S+LAL++   VLAQQA              G +GF+EDS  ++SSRTMY++ DNR  +  
Sbjct: 4   SSLALAVALGVLAQQA--------------GAAGFVEDSKLSLSSRTMYFNDDNRE-SGI 48

Query: 64  DLREAATALRFDYKSGFTQGTIGLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPTKN 123
           D +E+    + DY SGFTQGT+G G DV A   + LDGG G    A      N+FFP+ +
Sbjct: 49  DQKESGQGFKLDYLSGFTQGTVGFGVDVQALWGIHLDGGRGSRPDAN-----NTFFPSDS 103

Query: 124 NGTEPADSFGRAAGNVKFRISQTELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSNDI 183
           +G+   D + R  GN K R S+TE+H G  LAP+LPILVSND R+ PQTF+GG L S +I
Sbjct: 104 DGSAVHD-WARIGGNAKARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEI 162

Query: 184 PNVTFTGGELNRAEGRASSNSTGLSVAGGTRDSDSFKFGGVDYKPFGSSDNVIAKNLTLQ 243
            N+T   G+L  A GRASSN TGLSV+G  RDS+ F+F G DYK        +  +LTLQ
Sbjct: 163 DNLTINAGQLTHAMGRASSNRTGLSVSGAFRDSNKFQFAGGDYK--------LTPDLTLQ 214

Query: 244 YYYAQLQDFYKQNYFGLVHVLPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAKH 303
           YYY+ L+DFYKQ++ G  HV  + ++QSFKTDLRYFDSSSDGKNG++GY F+NNGGYAK+
Sbjct: 215 YYYSNLEDFYKQHFLGATHVFKIADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKN 274

Query: 304 ANEVDNKTYSAAFTYQLGGSSLMLGHIGVGDDGGFVWVNQGSL----ADPHAQGAGGSDF 359
           + EVDNKT+SA FTY LGG +LMLGH  VGDDGGFVW+NQGS+    +    +G GG+ F
Sbjct: 275 SGEVDNKTWSAMFTYTLGGHALMLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASF 334

Query: 360 YLFTDAVVGQFSRAGEQVNFGQYSYDFKAY-VPGLKASVAYLDGRDIKSKVAGGPDQKEN 418
           YLFTD+++ QF+RAGE   FGQYSYDF A  VPGLKASV+YL G D++++ +G     E 
Sbjct: 335 YLFTDSMINQFARAGENTTFGQYSYDFAALGVPGLKASVSYLRGDDVRNR-SGDGTYNEW 393

Query: 419 EADFRLDYVVQAGPLKGFGTTFRTGTYHGKNTGTADQDQTRLIFNYTY 466
           E D R+DY +Q G LKG G + R G Y G      D+DQTR I NYTY
Sbjct: 394 ERDARVDYTLQEGTLKGLGFSLRQGVYRGSGESALDKDQTRFIVNYTY 441