Pairwise Alignments

Query, 469 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 4e-42
 Identities = 130/458 (28%), Positives = 189/458 (41%), Gaps = 68/458 (14%)

Query: 37  GFLEDSHAAISSRTMYYSADNRS----------GTNNDLREA-ATALRFDYKSGFTQGTI 85
           GF+E S   + +R  Y++ DNR           G  N   EA A A+   + SGFTQGT+
Sbjct: 31  GFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAIISKFNSGFTQGTV 90

Query: 86  GLGFDVMAFGALRLDGGDGHTAGAGLSGNGNSFFPTKNNGTEPADSFGRAAGNVKFRISQ 145
           G G D  A   L+LD GDG   G     +     P  N G E  D + +  G  K R+  
Sbjct: 91  GFGVDAFAMIGLKLDTGDGRNGGR----SSFDVLPVDNKG-EARDEYTKVGGAAKVRLFD 145

Query: 146 TELHVGGGLAPVLPILVSNDSRVAPQTFDGGILTSNDIPNVTFTGGELNRAEGRASS--N 203
           T + V G + P  P++ S DSR+ P++F G  + +  I  +T  GG L+      SS  N
Sbjct: 146 TIVKV-GDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQPVSSNLN 204

Query: 204 STGLSVAGGTRDSDSFKFGGVDYKPFGSSDNVIAKNLTLQYYYAQLQDFYKQNYFGLVHV 263
              ++  GG  +S    +GG DY         I  N T+  Y +QL+D + Q Y G   V
Sbjct: 205 DNFVTFYGGPVNSPWIGYGGGDYS--------INDNWTVSVYASQLKDVWNQYYAGTSVV 256

Query: 264 LPLGNDQSFKTDLRYFDSSSDGKNGESGYQFNNNGGYAKHANEVDNKTYSAAFTYQLGGS 323
            PL +D +      Y+ +  +GK               K   E DN  +SA    + G  
Sbjct: 257 YPLSDDLALIGGFNYYKAVDEGK---------------KRLGEFDNNIWSAKVGVRYGAH 301

Query: 324 SLMLGHIGVGDDGGFVWVNQGSLADPHAQGAGGSDFYLFTDAVVGQFSRAGEQVNFGQYS 383
           +L L H     D  F ++ Q                ++        F+   E+    +Y 
Sbjct: 302 TLALSHQRNNGDDDFDYLRQ------------SDSIFVDNSIQYSDFNSPKERSWMLRYD 349

Query: 384 YDFKAY-VPGLKASVAYLDGRD----------IKSKVAGGP--DQKENEADFRLDYVVQA 430
            +F +Y +PGL     Y  G            +++   G P  +QK  E D  + YVVQ 
Sbjct: 350 LNFTSYGIPGLTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQT 409

Query: 431 GPLKGFGTTFRTGTYHGKNTGTADQDQTRLIFNYTYAI 468
           GP K      R  T        +D D+TR+I  Y  +I
Sbjct: 410 GPAKDLSFRLRQATTRA-TAFESDLDETRVIIEYPLSI 446