Pairwise Alignments

Query, 288 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 255 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  178 bits (452), Expect = 1e-49
 Identities = 97/245 (39%), Positives = 141/245 (57%), Gaps = 3/245 (1%)

Query: 18  DLLPRAVVAVNATSTSESWEHAPHSHRKGQLMYTLRGVIHCQIEAGIWIVPPQCALWIPG 77
           D + RAV+A+ +     +  H  HSHR+ Q +Y   GV+    + G W+VPPQ  +WIP 
Sbjct: 10  DAIARAVLAIGSDYPPGTMLHT-HSHRRAQFLYGATGVMEVGTDDGAWVVPPQRGVWIPA 68

Query: 78  GLPHAARGSGEAEVYCLLIDPDAAGALPAQCCTLSVSGLLHELISKAVSFPQLYDEDGAQ 137
           G PH  R  G      L I+P        QC  L+VS LL +L+ +A+  P  YD  G  
Sbjct: 69  GKPHRVRMLG-VSTRSLYIEPRDVPRKGDQCEVLNVSPLLRQLLMEAIEAPAEYDRQGRD 127

Query: 138 GRLIRTLLDELAQAP-IEDLHLPMPRDPRLRRLADSLLADPGDKATLGQWAMRIGMSERS 196
           G L+R +L E+A+A  +  LH+P+PRDP L  L    L  P   A    WA ++ +SER+
Sbjct: 128 GVLMRLVLHEVARADALPLLHVPLPRDPALAGLCVEFLRRPDIHAAPSTWAGQLNVSERT 187

Query: 197 MTRLLLEEFGLSFGRWRRQLHVILSLQRLARGDSVQRVALDLGYENASGFITMFRKAVGQ 256
             R    E G++FG+WR++  V+++L RLA G+ V  VALD+GY++   F TMFRK +G+
Sbjct: 188 FNRRFSLETGMAFGKWRQRACVLVALSRLAAGEPVTVVALDMGYDSPGAFSTMFRKTLGR 247

Query: 257 PPARY 261
           PP+ +
Sbjct: 248 PPSHF 252