Pairwise Alignments

Query, 339 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 1e-44
 Identities = 102/310 (32%), Positives = 167/310 (53%), Gaps = 5/310 (1%)

Query: 1   MTDLKDVARLAGVSRATAARTFASPDQVRPTTREQVFAAARELGFRPNLLGRQLRLQTTQ 60
           M  +KDVA LAG+S  T +        V    R +V AA  EL + P+ + R L+ ++T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  LIGVVVPNLLNPVFAEQFQAMERAARARGYSLLLATTDYSSERECSVVEELLRQRVDGLV 120
            IG++VPN +NP FAE  + +E A    GY ++L  +D + +++ S +  LL +R+DGLV
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 LTVTDAESNSVLSSLNTEQTPFVLAYHQPSNPNYSAVSVDNRAGMALATRYLLDAGHRRI 180
           +  +  + + +L SL + +TP V+   +    +   V +D+  G  LATR+LL+ GHR +
Sbjct: 121 V-ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179

Query: 181 SMVAGPALQSDRARLRYAGYCDAMLEYS--LEPRSVIEMPAHTQAEFAAIQPVLQGADAP 238
           + + GPA ++   +LR +G+  AM E    +    V+     +    AA   VL+G   P
Sbjct: 180 AYIGGPA-ETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEG-KRP 237

Query: 239 TALVCSNDFLAISLIAELRRNAWNVPEQLSVMGFDGISLGTQMHPTLCSVVQPIALLAST 298
           +A+   ND +   ++        +VP +LSV+GFD I L   ++P+L +V Q I  L  +
Sbjct: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297

Query: 299 VIDQLLAQIA 308
               LL +IA
Sbjct: 298 AASLLLTRIA 307