Pairwise Alignments

Query, 339 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  148 bits (374), Expect = 2e-40
 Identities = 90/308 (29%), Positives = 158/308 (51%), Gaps = 4/308 (1%)

Query: 4   LKDVARLAGVSRATAARTFASPDQVRPTTREQVFAAARELGFRPNLLGRQLRLQTTQLIG 63
           +KDVA  A VS AT +R   +PD+V   TR +V  AARE+G+ P  +GR ++   ++ I 
Sbjct: 12  MKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTIL 71

Query: 64  VVVPNLLNPVFAEQFQAMERAARARGYSLLLATTDYSSERECSVVEELLRQRVDGLVLTV 123
           V+VP++ +P F+E  + +E  A   GY +L+    + +++E + ++ ++ +++DG++L  
Sbjct: 72  VIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLG 131

Query: 124 TDAESNSVLSSLNTEQTPFVLAYHQPSNPNYSAVSVDNRAGMALATRYLLDAGHRRISMV 183
           +    ++ +        P V+A           V +DN      A  YL + GH+RI  +
Sbjct: 132 SRLPFDASIEE-QRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCI 190

Query: 184 AGPALQSDRARLRYAGYCDAMLEYSL--EPRSVIEMPAHTQAEFAAIQPVLQGADAPTAL 241
           AGP  +      R  GY  A+    +  +P+ +       +A   A+Q +L     PTA+
Sbjct: 191 AGPE-EMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAV 249

Query: 242 VCSNDFLAISLIAELRRNAWNVPEQLSVMGFDGISLGTQMHPTLCSVVQPIALLASTVID 301
            C +D +A+  +++ +R    VPE LS++GFD I L     P L ++ QP   +    + 
Sbjct: 250 FCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAML 309

Query: 302 QLLAQIAG 309
            LL Q+ G
Sbjct: 310 LLLDQMQG 317