Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  302 bits (773), Expect = 2e-86
 Identities = 173/439 (39%), Positives = 243/439 (55%), Gaps = 44/439 (10%)

Query: 11  LTGSLGVALSPLASADFLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQSG 70
           L  S  + ++P ASA F+ D K +L +RNFY+N D R+  A  SK +EW Q FILN QSG
Sbjct: 9   LACSATLLVAPYASAAFVEDFKGSLELRNFYYNRDFRNDGATQSKRDEWAQGFILNLQSG 68

Query: 71  FTDGTVGFGLDAIGMLGITLDSGAGRHVGSSMIPND-DGKATDNWARGGATAKARFAKSE 129
           FT+G VGFG+DA+G+LG+ LDS   R  GS ++  D D +  D + +  ATAKAR  K+E
Sbjct: 69  FTEGPVGFGIDAMGLLGVKLDSSPDR-TGSGLLAYDSDRQVEDEYGKFVATAKARMGKTE 127

Query: 130 LRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRSGLA 189
           LR G + P +P+L SN+ RLLPQ F GG +T  DID LT+   ++     R S+D   L 
Sbjct: 128 LRIGGVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTATRINAVKQRNSTDFESLT 187

Query: 190 VAG-GTQESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPLGDYGSLKTD 248
             G    E++ +NY   D++  KD+    + A LED Y+ +FAG+  + PL + G++  D
Sbjct: 188 ATGYAPVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYKSYFAGIKVIKPLWE-GNVIAD 246

Query: 249 LRYFKTTSDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPHAITAGYQQV 308
           +R F  +  G                      GE+DN T S+ F YS+  H I  GYQ+ 
Sbjct: 247 VRVFDASETGSKK------------------LGEVDNRTLSSYFAYSIKGHTIGGGYQKA 288

Query: 309 SDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDFASLGVPGLK 368
             D++FA +N          G+  YL+ +  V TF    ER  FA+Y +DFA+LGVPGL 
Sbjct: 289 WGDTSFAFVN----------GTDTYLFGESLVSTFTAPEERVWFARYDFDFAALGVPGLL 338

Query: 369 ASVMYLKGDHI------------LTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGV 416
            +  Y+KGD +            L  +G D  EWER   + YV+QSG  K V F WRN  
Sbjct: 339 FTTRYMKGDDVNPDLLTSRQAASLRLNGEDGKEWERVTDISYVIQSGPAKGVSFQWRNST 398

Query: 417 SRSEVARDQDQNRVFVNYS 435
           +RS  A   ++NR+ + Y+
Sbjct: 399 NRSTYADSANENRLIMRYT 417