Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  281 bits (720), Expect = 2e-80
 Identities = 173/432 (40%), Positives = 232/432 (53%), Gaps = 49/432 (11%)

Query: 23  ASADFLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQSGFTDGTVGFGLDA 82
           A A F+ D   +L +RNFYF+ D    +A  S+  EW Q F+L  QSG+TDG VGFGLDA
Sbjct: 22  AQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGLDA 81

Query: 83  IGMLGITLDSGAGRHVGSSMIP-NDDGKATDNWARGGATAKARFAKSELRYGYLRPNLPI 141
            GMLG+ LDS   R  GS ++P   D +A D++A+  AT KAR A+SEL+ G L P LP+
Sbjct: 82  AGMLGLKLDSSPDRS-GSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLPL 140

Query: 142 LVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRSGLAVA------GGTQ 195
           L SN  RL PQ F+G Q+ SKD+D  T    Q+  T  R S+D   L           T 
Sbjct: 141 LASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATV 200

Query: 196 ESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPLGDYGSLKTDLRYFKTT 255
            S+   YAG DYQ   +L L  + + LED +++ FAG      LG  G + T+ R+F   
Sbjct: 201 TSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRLGP-GDVFTEWRWF--- 256

Query: 256 SDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPHAITAGYQQVSDDSNFA 315
               N+   GRA    LGG        +DN T S  F YS+  H  + GYQ+V  D+ +A
Sbjct: 257 ----NAREQGRA---LLGG--------VDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYA 301

Query: 316 QLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDFASLGVPGLKASVMYLK 375
            +          GG+  YL++++ V TF  A ER    +Y Y+FA++G+PGL  +V Y+K
Sbjct: 302 YV----------GGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVK 351

Query: 376 GDHI------------LTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGVSRSEVAR 423
           GD +            L A   +  EWER   + YVVQSG  +NV   WRN   RS  A 
Sbjct: 352 GDQVDPQRIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNASMRSNFAD 411

Query: 424 DQDQNRVFVNYS 435
             D+NRV V Y+
Sbjct: 412 AADENRVIVGYT 423