Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  323 bits (828), Expect = 6e-93
 Identities = 191/439 (43%), Positives = 260/439 (59%), Gaps = 45/439 (10%)

Query: 10  VLTGSLGVALSPLASADFLSDSKANLSMRNFYFNNDNRDG------TAAPSKTE--EWGQ 61
           +L G L VA     +A F+ DSK  L +RN YFN + RD        AA +K+E  EW Q
Sbjct: 13  LLCGWLPVA----GAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQ 68

Query: 62  AFILNYQSGFTDGTVGFGLDAIGMLGITLDSGAGRHVGSSMIP-NDDGKATDNWARGGAT 120
            F+L+YQSGFT GT+G G+DA+G+LG+ LDSG GR  G+ ++P +DDG+A D +A  G T
Sbjct: 69  GFLLDYQSGFTQGTLGLGVDAMGLLGVRLDSGRGRS-GTGLLPVHDDGRAADEFASAGIT 127

Query: 121 AKARFAKSELRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGR 180
           AKAR   + +++G L P  P+LV ND RLLPQ++ G Q+TS DIDNLTL  G L     R
Sbjct: 128 AKARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQR 187

Query: 181 GSSDRSGLAVAG-GTQESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPL 239
            SSD +GL + G G   S  F++AGADY V+K L L Y++  LE +Y+Q FAGL+H LPL
Sbjct: 188 DSSDSTGLYLDGYGGPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDLPL 247

Query: 240 GDYGSLKTDLRYFKTTSDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPH 299
           G  G L TDLRYFK       S  +G A G           G IDN+ +S    Y+   H
Sbjct: 248 GG-GVLTTDLRYFK-------SRDSGTAYG-----------GGIDNDMFSGQLSYAHSGH 288

Query: 300 AITAGYQQVSDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDF 359
            + AGYQ +  ++    ++          G+++Y +++  +  FI+  E+T  A YAY+F
Sbjct: 289 TVGAGYQVLDGEAGLPYIS----------GATVYSFSNVGIGKFIEEEEKTWMASYAYNF 338

Query: 360 ASLGVPGLKASVMYLKGDHILTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGVSRS 419
           A+ GVPGL     YL GD+   + G    EWERD  + YVVQ G  K +G   RN V RS
Sbjct: 339 AAAGVPGLTFMTRYLSGDN-GRSGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRS 397

Query: 420 EVARDQDQNRVFVNYSIPL 438
           + AR +D NR+++ Y I +
Sbjct: 398 DFARGRDSNRLYLTYDIAI 416