Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  317 bits (813), Expect = 4e-91
 Identities = 182/438 (41%), Positives = 251/438 (57%), Gaps = 37/438 (8%)

Query: 9   SVLTGSLGVA-LSPLASADFLSDSKANLSMRNFYFNNDNRDGTAAP-SKTEEWGQAFILN 66
           S +  +L +A ++P++ A F  DS A    RN YFN D RDGT+A  SK +EW Q FILN
Sbjct: 20  SAIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFILN 79

Query: 67  YQSGFTDGTVGFGLDAIGMLGITLDSGAGRHVGSSMIPNDDGKATDNWARGGATAKARFA 126
           ++SG+TDGTVGFGLDA+GMLGI LDS   R     +  +DDGKA D +++ G T K + +
Sbjct: 80  FESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGKVKIS 139

Query: 127 KSELRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRS 186
           ++EL+ G L P LP L  NDGR+LPQ+F+GG +TSK+I  LT  GG++     R  ++  
Sbjct: 140 QTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTNWE 199

Query: 187 GLAV------AGGTQESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPLG 240
            LA+       GGT  ++     G DYQ T  +   Y++A L+D Y+QHF G++   P G
Sbjct: 200 DLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHFIGMVATQPWG 259

Query: 241 DYGSLKTDLRYFKTTSDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPHA 300
             G+L  DLR          S  AG A+            G IDN T +    Y+LG H 
Sbjct: 260 P-GTLGADLRL-------AMSDDAGAAK-----------AGNIDNTTVNGMLSYALGGHK 300

Query: 301 ITAGYQQVSDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDFA 360
           ++A +QQ+S +S F  ++          G+  YL     +  F  A ER+  A+Y Y+FA
Sbjct: 301 VSAAWQQLSGESAFPYVD----------GADPYLVNFVQINDFAGADERSWQARYDYNFA 350

Query: 361 SLGVPGLKASVMYLKGDHILTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGVSRSE 420
           +LGVPGL     Y+ GD++  A+G +  EWER+  L YVVQSG  KNV    RN   RS 
Sbjct: 351 ALGVPGLTFMTRYISGDNVSRAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSN 410

Query: 421 VARDQDQNRVFVNYSIPL 438
            ARD D+ R+ V+YS+ L
Sbjct: 411 FARDADEVRLLVSYSVAL 428