Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  434 bits (1115), Expect = e-126
 Identities = 232/442 (52%), Positives = 291/442 (65%), Gaps = 26/442 (5%)

Query: 11  LTGSLGVALSPLASADFLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQSG 70
           L  +LGV      +A F+ DSK +LS R  YFN+DNR+        +E GQ F L+Y SG
Sbjct: 8   LAVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGI---DQKESGQGFKLDYLSG 64

Query: 71  FTDGTVGFGLDAIGMLGITLDSGAGRH--VGSSMIPND-DGKATDNWARGGATAKARFAK 127
           FT GTVGFG+D   + GI LD G G      ++  P+D DG A  +WAR G  AKARF+K
Sbjct: 65  FTQGTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWARIGGNAKARFSK 124

Query: 128 SELRYGY-LRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRS 186
           +E+ YG  L P LPILVSNDGRLLPQ+F+GG + SK+IDNLT+  GQL H  GR SS+R+
Sbjct: 125 TEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGRASSNRT 184

Query: 187 GLAVAGGTQESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPLGDYGSLK 246
           GL+V+G  ++SN F +AG DY++T DL LQYYY+NLED+Y+QHF G  HV  + D  S K
Sbjct: 185 GLSVSGAFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFLGATHVFKIADNQSFK 244

Query: 247 TDLRYFKTTSDGKNSSVAGRAEGYKL---GGYTKNGTGEIDNNTWSAAFIYSLGPHAITA 303
           TDLRYF ++SDGKN        GY     GGY KN +GE+DN TWSA F Y+LG HA+  
Sbjct: 245 TDLRYFDSSSDGKNGQT-----GYAFDNNGGYAKN-SGEVDNKTWSAMFTYTLGGHALML 298

Query: 304 GYQQVSDDSNFAQLNQGGLVN-------KGEGGSSLYLYTDRTVQTFIQAGERTAFAQYA 356
           G+QQV DD  F  LNQG +         +G GG+S YL+TD  +  F +AGE T F QY+
Sbjct: 299 GHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQYS 358

Query: 357 YDFASLGVPGLKASVMYLKGDHILTASGNDA-SEWERDISLDYVVQSGTFKNVGFGWRNG 415
           YDFA+LGVPGLKASV YL+GD +   SG+   +EWERD  +DY +Q GT K +GF  R G
Sbjct: 359 YDFAALGVPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLRQG 418

Query: 416 VSR--SEVARDQDQNRVFVNYS 435
           V R   E A D+DQ R  VNY+
Sbjct: 419 VYRGSGESALDKDQTRFIVNYT 440