Pairwise Alignments

Query, 267 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

Subject, 294 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Variovorax sp. SCN45

 Score =  143 bits (361), Expect = 4e-39
 Identities = 93/287 (32%), Positives = 138/287 (48%), Gaps = 21/287 (7%)

Query: 1   MPLPFVKMHAHGDDFIIIDRRGLHDPITAKVARQLGNRHTGIGFNQLAVLLDCDDAAARI 60
           M + F KM   G+DF+++D       ++A   R L +RH G+G +Q+  +          
Sbjct: 1   MRIRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAEGVDF 60

Query: 61  KF--WNPNGTLLATCGSATRGVADRLMHEAGTDSVVLR--TDRGLLTCARAAGRQISVNM 116
           ++   N +G  +  CG+  R     +     TD   +R  T  G++     A  +++V+M
Sbjct: 61  QYVIHNADGGEVEQCGNGARCFMRFVSEHKLTDKTEVRVQTLAGVIAPRMGADGRVTVDM 120

Query: 117 GEPSLDWSAVPLAEA----------------MDTLTLPIDGNPAACSMGNPHCTFFVEDL 160
           G P  +   VP   A                + T       + A  SMGNPH    V+++
Sbjct: 121 GAPVFETERVPFDTAGLDPQPEGAWQKWHLALGTRAGSAIVSVAVLSMGNPHAVQVVDNV 180

Query: 161 TAVDVATVGPALEIHPLFPAKTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVN 220
               VA  GP +E HP FP + N  F+QV+DR HI+LR++ERG G  L  G+  C AVV 
Sbjct: 181 DTAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRTHIKLRVFERGAGETLACGTGACAAVVA 240

Query: 221 GIRRGLLDATVQVHCDGGTVTVHWAGEG-AVVLTGSVEPVMQGSAYV 266
           GIR GLL+  V V   GG +T+ W GEG  V++TG    V +G   V
Sbjct: 241 GIRLGLLERRVDVQTHGGVLTIEWQGEGQPVLMTGPATTVFEGDIEV 287