Pairwise Alignments

Query, 267 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

Subject, 274 a.a., diaminopimelate epimerase (EC 5.1.1.7) from Enterobacter asburiae PDN3

 Score =  151 bits (381), Expect = 2e-41
 Identities = 94/270 (34%), Positives = 138/270 (51%), Gaps = 10/270 (3%)

Query: 3   LPFVKMHAHGDDFIIIDRRGLHDPITAKVARQLGNRHTGIGFNQLAVLLDC--DDAAARI 60
           + F KMH  G+DF+++D    +   + ++ R+L +RH G+GF+QL V+      D     
Sbjct: 1   MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPDLDFHY 60

Query: 61  KFWNPNGTLLATCGSATRGVAD--RLMHEAGTDSVVLRTDRGLLTCARAAGRQISVNMGE 118
           + +N +G+ +  CG+  R  A   RL        + + T  G +  +      + VNMGE
Sbjct: 61  RIFNADGSEVNQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTDDELVRVNMGE 120

Query: 119 PSLDWSAVPLA--EAMDTLTLPIDGNPAAC---SMGNPHCTFFVEDLTAVDVATVGPALE 173
           P+ + S VP    +A  T  +        C   SMGNPHC   V+D+    V T+GP LE
Sbjct: 121 PNFEPSVVPFRANKAEKTYIMRAAEQTVLCGVVSMGNPHCVIQVDDVETAAVETLGPVLE 180

Query: 174 IHPLFPAKTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGLLDATVQV 233
            H  FP + N+ F+QV+ R HIRLR++ERG G     GS  C AV  GI +GLL   V+V
Sbjct: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGISQGLLAEEVRV 240

Query: 234 HCDGGTVTVHWAGEG-AVVLTGSVEPVMQG 262
              GG + + W G G  + +TG    V  G
Sbjct: 241 ELPGGRLDIAWKGPGHPLYMTGPAAHVYDG 270