Pairwise Alignments

Query, 271 a.a., sigma factor sigB regulation protein rsbQ from Pseudomonas simiae WCS417

Subject, 268 a.a., Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway from Variovorax sp. SCN45

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 31/261 (11%)

Query: 17  STLVFSHGFGCNQAMWN-YLAPQFSERFRVVMYDLVGAGLSDLSAFDKAKYSSLDGYARD 75
           ST++ S G G +   W   L    +   RVV YD  G G S  +A  +A   +++  ARD
Sbjct: 16  STVLLSSGLGGSAGFWQPQLGALIAAGHRVVAYDQRGTGRSP-AALPEAY--AIEDMARD 72

Query: 76  LNEIIDAFAVGPVILVSHSVSAMISTLADRQAPNRIAAHVMIG----PSP---RYIDAD- 127
           + EI+DA          H++  ++       AP R+A+ V++     P+P   R  DA  
Sbjct: 73  VLEILDATRTAQCHFAGHALGGLVGLRLALDAPARVASLVLVNAWSKPNPHSARCFDARL 132

Query: 128 ---GYVGGFKRGDIQDLLDTLDSNYLGWSSAMAPVIMGAPGQPALSQELTDSFCRTEPEI 184
              G VG     + Q +              + P    A     ++ E+  +F     E 
Sbjct: 133 ALLGAVGPRAYVEAQPIF-------------LYPAAWCAAHAKRVADEVDHAFAHFPGE- 178

Query: 185 AKQFARVTFMS--DNRQDVIGLATPVLVLQSSDDLIAPVAVGEYLHSVLPNSTYCLVDNV 242
           A   AR+  +   D    +  +  P LV  + DD++ P    + L   LPN+T  L+ + 
Sbjct: 179 ANMRARIAALRAFDIDARLGDITAPTLVAAAKDDVLVPWTCSQRLADELPNATLNLMAHG 238

Query: 243 GHCPHMSAPHACATAMHSFLA 263
           GH   ++   A  + + +FL+
Sbjct: 239 GHAHSVTEADAFNSTLLAFLS 259