Pairwise Alignments

Query, 271 a.a., sigma factor sigB regulation protein rsbQ from Pseudomonas simiae WCS417

Subject, 377 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 13  GNGSSTLVFSHGFGCNQAMWNYLAPQFSERFRVVMYDLVGAGLSD--LSAFDKAKYSSLD 70
           GN   T+V   G G N   ++ LAP  + R RVV     G GLSD  L      ++  ++
Sbjct: 86  GNTGPTIVLLAGLGGNARCFDSLAPALAARSRVVAISRRGYGLSDKPLPVKSATQHYEVE 145

Query: 71  GYARDLNEIIDAFAVGPVILVSHSVSAMISTLADRQAPNRIAAHVMIGPSPRYIDADGYV 130
               DL  ++D   +  V+L  HS++    T    + P R+   + +  +  Y   DG  
Sbjct: 146 TLGSDLKAVLDDLGLLRVVLGGHSIAGNELTYFAGRHPERVRGLIYLDTTFDY-TKDGER 204

Query: 131 GG 132
           GG
Sbjct: 205 GG 206