Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 382 a.a., DNA replication and repair protein RecF from Xanthobacter sp. DMC5

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 97/358 (27%), Positives = 155/358 (43%), Gaps = 27/358 (7%)

Query: 2   SLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARL---- 57
           ++ ++S+T  R+     ++   R  +L G NG+GKT++LEA+  L   R  R A+L    
Sbjct: 5   AILKLSLTGFRSYPAAQVAVEARAIVLTGPNGAGKTNILEALSFLSPGRGLRRAQLADVG 64

Query: 58  -------LPVIQYEQLACTVFGQVELAEGGHSSLGISRD---RGGEFQIRIDGQNARSAA 107
                  +P       A + F +  L   G   LG   D    GG+ + RIDG+   SA 
Sbjct: 65  HRPPGAHMPDADGAPWAVSAFIEGAL---GEVRLGTGYDPAQEGGQRRCRIDGEAVPSAN 121

Query: 108 QLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLR 167
              + L +  + P+   L  G P  RR++LD  V  V+         L++ALR RN  L 
Sbjct: 122 AFLDHLKVLWLTPEMDGLFLGPPGDRRRYLDRLVLAVDASHGTRVNGLERALRSRNRLLE 181

Query: 168 HG----TLDAASQAAWDRELCLASDEIDEYRR--AYIKALKPVFEQTLSELLELEGLT-- 219
                  LDA      +  + +A+  ++   R  A I A +          L L+G    
Sbjct: 182 ENGSGRFLDAMEHEVAELAVAVAAARLETVARLSAEIAAHRDEASPFPFAELALDGAVER 241

Query: 220 -LSYYRGWDKERELSAVLATSLQRDQQIGHTQAGPQRADLRLRLGAHN-AADILSRGQQK 277
            ++ +   + E    A+L  +  RD+  G T  GP   DL +  G     A   S G+QK
Sbjct: 242 LIAQHPALEVEDRYRALLRGNRPRDRAAGRTLEGPHLTDLSVSHGEKRLPAARCSTGEQK 301

Query: 278 LVVCALRIAQGHLVSQARRGQCIYLVDDLPSELDEQHRRALCRLLEELRCQVFITCVD 335
            ++  L ++   LV   +    + L+DD+ + LD + R  L   L  L  QV++T  D
Sbjct: 302 SLLIGLTLSHARLVGSMQGLSPLLLLDDVVAYLDAERRAGLFEALARLGAQVWMTGAD 359