Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 367 a.a., DNA replication and repair protein from Pseudomonas putida KT2440

 Score =  663 bits (1710), Expect = 0.0
 Identities = 328/367 (89%), Positives = 346/367 (94%)

Query: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60
           MSL R+ VTAVRNLHPVTL PSPRINIL+GANGSGKTSVLEA+HLLGLARSFRS RL PV
Sbjct: 1   MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV 60

Query: 61  IQYEQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           IQYEQ ACTVFG+V+L EGG S+LG+SR+R GEF IRIDGQNARSAAQLAE+LPLQLINP
Sbjct: 61  IQYEQAACTVFGEVQLTEGGTSNLGVSRERQGEFTIRIDGQNARSAAQLAELLPLQLINP 120

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAASQAAWD 180
           DSFRLLEGAPKIRRQFLDWGVFHVEPRF+  WQRLQKALRQRNSWLRHGTLD ASQAAWD
Sbjct: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPASQAAWD 180

Query: 181 RELCLASDEIDEYRRAYIKALKPVFEQTLSELLELEGLTLSYYRGWDKERELSAVLATSL 240
           RELCLAS EIDEYRR YIKALKPVFE+TLSEL+EL+GLTLSYYRGWDK+REL  VLA+SL
Sbjct: 181 RELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQEVLASSL 240

Query: 241 QRDQQIGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI 300
            RDQQ+GHTQAGPQRADLRLRL  +NAADILSRGQQKLVVCALRIAQGHLVSQARRG CI
Sbjct: 241 LRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVVCALRIAQGHLVSQARRGHCI 300

Query: 301 YLVDDLPSELDEQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT 360
           YLVDDLPSELD+QHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT
Sbjct: 301 YLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT 360

Query: 361 QTHDHRE 367
           QTHDHRE
Sbjct: 361 QTHDHRE 367