Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 357 a.a., DNA replication/repair protein RecF from Escherichia coli ECRC62

 Score =  280 bits (717), Expect = 3e-80
 Identities = 148/360 (41%), Positives = 224/360 (62%), Gaps = 4/360 (1%)

Query: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60
           MSL+R+ +   RN+    L+ SP  N L GANGSGKTSVLEAI+ LG  R+FRS ++  V
Sbjct: 1   MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV 60

Query: 61  IQYEQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           I++EQ A  + G+++  E   +++G+++D+ G+ ++RIDG +    A+LA ++P+QLI P
Sbjct: 61  IRHEQEAFVLHGRLQ-GEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITP 119

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAASQAAWD 180
           + F LL G PK RR FLDWG FH EP F   W  L++ L+QRN+ LR  T     +  WD
Sbjct: 120 EGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRP-WD 178

Query: 181 RELCLASDEIDEYRRAYIKALKPVFEQTLSELLELEGLTLSYYRGWDKERELSAVLATSL 240
           +EL   +++I  +R  Y   +      T  + L    LT S+ RGW+KE E + VL  + 
Sbjct: 179 KELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNF 238

Query: 241 QRDQQIGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI 300
           +RD+Q+ +T  GP +ADLR+R       D LSRGQ KL++CALR+AQG  +++    +C+
Sbjct: 239 ERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCL 298

Query: 301 YLVDDLPSELDEQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT 360
           YL+DD  SELD++ R  L   L+  + QVF++ +  E + +   ++    +F VE+G+IT
Sbjct: 299 YLIDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVID--MSDENSKMFTVEKGKIT 356