Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 368 a.a., recF protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  120 bits (302), Expect = 4e-32
 Identities = 98/368 (26%), Positives = 177/368 (48%), Gaps = 9/368 (2%)

Query: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60
           M L  + +   +N     ++ SP IN   G NGSGKT++L+AIH L L +S  +   +  
Sbjct: 1   MHLKSLQLIQFKNYEKALVAFSPEINCFLGINGSGKTNMLDAIHYLSLTKSAFNPVDIQN 60

Query: 61  IQYEQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           ++++Q   ++ G+ + A G    +    +   + Q+  +G+     ++   +LP+ LI P
Sbjct: 61  VRHDQGFFSMKGEFDKA-GKSVEIQCILEARKKKQVFNNGKAYEKMSEHIGLLPVVLIAP 119

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNS----WLRHGTLDAASQ 176
           D   L++   + RR+F D  +  ++  ++    R Q  L+QRN+    ++    +D    
Sbjct: 120 DDTSLIKEGSEERRKFFDSLLSQLDKNYLGKLVRYQHFLKQRNALIKQFVEQDRMDKNLL 179

Query: 177 AAWDRELCLASDEIDEYRRAYIKALKPVFEQTLSELL-ELEGLTLSYYRGWDKERELSAV 235
             +D EL   S  + E+R+A+I   KP      +E+  E E + + Y    +K  +  A 
Sbjct: 180 EPYDVELIQLSKWLYEHRKAFIDRFKPYLLHHYAEISGEREAVEIRYESQCEKP-DFEAY 238

Query: 236 LATSLQRDQQIGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQAR 295
               LQRD  +  T AG  + D    +  H      S+GQQK  + AL++AQ  +  +  
Sbjct: 239 FYGCLQRDLILKRTNAGVHKDDFIFEIDGHPLKKFGSQGQQKSFLIALKLAQFQVFKEET 298

Query: 296 RGQCIYLVDDLPSELDEQHRRALCRLLEELRC-QVFITCVDHELLREGWQ-TETPVALFH 353
             + + L+DD+  +LD+     +  L+      Q+FIT    E  R+  Q  E  +A FH
Sbjct: 299 GTKPLLLLDDIFDKLDDFRIGKMMELVAHHEFGQLFITDARPERTRKIMQDIEADIAYFH 358

Query: 354 VEQGRITQ 361
           +E G++++
Sbjct: 359 IEGGKVSR 366