Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 360 a.a., DNA replication and repair protein RecF from Acinetobacter radioresistens SK82

 Score =  216 bits (549), Expect = 1e-60
 Identities = 136/362 (37%), Positives = 204/362 (56%), Gaps = 8/362 (2%)

Query: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60
           M ++R+++  VRNL  V LS     N+ +GANGSGKTS+LEAIHLL   RSFR+      
Sbjct: 1   MYITRLNIERVRNLSAVALSELQPFNVFYGANGSGKTSILEAIHLLATGRSFRTYIPKHY 60

Query: 61  IQYEQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           IQ       VF     A+     +G+ +   GE  I+++G    +  QLA++L LQ I+P
Sbjct: 61  IQSGASDTIVF-----AQSATEKIGMQKMLSGEQIIKVNGDTVATQGQLAKMLALQYIDP 115

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLR-HGTLDAASQAAW 179
            S  +++   K RRQ LDW +FHVEP F  TWQ   +AL+QRNS L+   TL       W
Sbjct: 116 LSTDIIDHGAKPRRQLLDWLMFHVEPEFYQTWQYYSRALKQRNSLLKSRQTLSVDELDPW 175

Query: 180 DRELCLASDEIDEYRRAYIKALKPVFEQTLSELLELEGLTLSYYRGWDKERELSAVLATS 239
           ++ L    + +   R   ++  K  F+Q LS+LL    + L Y  G+  E+ L   L   
Sbjct: 176 NKMLASYGELLHAQRSQVMEQWKIYFKQDLSQLLPDLEIELDYVSGFHSEQGLYQDLTLY 235

Query: 240 LQRDQQIGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQC 299
            Q+D    +T+ GP RADLRL+    +A +ILSRGQ+KL++ AL+++Q  ++  A   + 
Sbjct: 236 HQKDLDRRYTEYGPHRADLRLKTPLGDADNILSRGQKKLLIMALKLSQIAML-HASNKET 294

Query: 300 IYLVDDLPSELDEQHRRALCRLLEELRCQVFITCVDHELLREG-WQTETPVALFHVEQGR 358
           + L+DDL +ELD   ++ L   L +L  QVFIT ++H+ +++          LFHVE G+
Sbjct: 295 VVLLDDLTAELDLTAQQRLIERLSQLGSQVFITTLEHKSVQQHLHDLSISYQLFHVEHGQ 354

Query: 359 IT 360
           ++
Sbjct: 355 VS 356