Pairwise Alignments

Query, 517 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

Subject, 488 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 103/471 (21%), Positives = 172/471 (36%), Gaps = 58/471 (12%)

Query: 35  YECLESELTKAQSIHGTRQPDWHKILETSERLLRQQSKDLRVVVWMTWALYQRESYPGLL 94
           Y+ ++ E+ K   +      DW  I E S + L +Q K LR+V  ++ A  +   +    
Sbjct: 35  YQAIDQEMVKLGGLQEA-SIDWDYIEEASAQYLERQCKHLRIVAHLSVAWLRSGCWERWG 93

Query: 95  AGLGLLRYLCEHHWVESYPE--------KLRTRSAAFAWLVLRIEPL-----------FA 135
             L LL  + +++W  ++P         K +     F  L+  +  L            A
Sbjct: 94  FTLALLGGMIDNYWETAHPTPGPKGFLTKRKIVGLLFNRLIDALPRLDRFTYTPAHAAAA 153

Query: 136 QGL--PLQNQQLLFRAVLEHLTSLEELWGRHLGDDAPLLLPIRRQLAQRLEQALQADAPA 193
           +G    L  QQ   +     L  LE L  +H          +   + +R       ++P 
Sbjct: 154 KGALARLLRQQEAAQLAPAVLVELERLLHKHTA--------LANGIGERDAPKAPVESPQ 205

Query: 194 -AGLSGVIAQVKQATSQLLKSEPVVDNEKDAGKLLRTLQEQARPLCAWWLRQNATDLRAL 252
            A L+ VIA  K   S          NE++  + + ++ E          +Q+  D    
Sbjct: 206 PAPLADVIATPKPCLSG--------GNERETRRAILSMAELIN-------QQDPYDPTGY 250

Query: 253 RLNRTLNWLVLSGYPDADSERVTTLRGPAPEKLKRYQERFAQGH-HADLVLELEASLAGA 311
           +L R   W  +   P       T L     +    Y+E  A     A L+  +E S++ +
Sbjct: 251 QLRRFGLWAHIQAAPQTRQCNRTELMAVPRDIASDYEEAIAGTVIDAALLQRVEKSVSAS 310

Query: 312 MFWFDGLHMLWQCLEALRAEQAMIELEVTFALLLQRLPDLPSFCFHDGIPFADAASRDWI 371
            FW  G  +       L   +    +    A  + R+P L   CF DG  F D     W+
Sbjct: 311 PFWIRGSFLAATAASRLAMGEVAEAIRAATARFVLRMPALQQLCFSDGRVFVDDQCLAWL 370

Query: 372 TLQVSRHLQTPESAAVVIDTEAEPWESALQAVAPRLRQDGLKAAIHELKQGMYA-ARSER 430
                +  Q   S         + + S  + +  +L   G++  +  L QGM A  R+ R
Sbjct: 371 KGADGQSEQAEAS---------QEFTSLREELVSQLESGGVEPVLLRL-QGMQADFRAPR 420

Query: 431 ARFHWRLAQARLCVQAGKHELAKIQLEHLDHELQHTGLEHWEPELALQVTQ 481
            R H  L  A L    G   LA+     +   +Q T    WEPE+  ++ Q
Sbjct: 421 ERCHTTLIAADLLAARGVSWLAQDLCAGVARTMQQTTASDWEPEVFQRLQQ 471