Pairwise Alignments

Query, 517 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

Subject, 361 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 78/310 (25%), Positives = 125/310 (40%), Gaps = 49/310 (15%)

Query: 25  AGGDMRFSSEYECLESE-------LTKAQSIHGTRQPDWHKILETSERLLRQQSKDLRVV 77
           +G D+ FS+ ++ ++         LT+       +  DW +++  S + L QQSKDL +V
Sbjct: 21  SGEDLSFSALFDQIKEARRADPDYLTQGDWQTDLKTADWEQVINLSAQGLAQQSKDLMLV 80

Query: 78  VWMTWALYQRESYPGLLAGLGLLRYLCEHHWVESYP---EKLRTRSAAFAWL-------- 126
            W+   L QRE + G+  GL L   L    W   YP   + L  R+A  +WL        
Sbjct: 81  AWLCEGLAQREHFEGITFGLELTEQLLVAFWETLYPTLEDGLDERAARLSWLKTTLTDIA 140

Query: 127 ------------VLRI-EPLFAQGLPLQNQQLLFRAVLEHLTSLEELWGRHLGDDAPLLL 173
                       VLR  E    + L LQN + +  A+ E   + E         D   L 
Sbjct: 141 GGLPIIQGQNFGVLRYDESRHVENLALQNPKAMQTALNEGKINAEIFQRSVALTDTDYLR 200

Query: 174 PIRRQLAQRLE--QALQA--------DAPA-AGLSGVIAQVKQATSQLLKS-----EPVV 217
              +Q+A  L   + LQA        +AP+ A L+ ++++  Q   +LLK       P +
Sbjct: 201 AKAQQIATSLNACKRLQASADRLFGHEAPSFASLADMLSRASQLAEKLLKDRGVELHPAI 260

Query: 218 DNEKDAGKLLRTLQEQARPLCAWWLRQNATDLRALRLNRTLNWLVLSGYPDADSERVTTL 277
             E     +   L E   P+ A         LR   L R   + +L+G   A   + +  
Sbjct: 261 PEEAQPQAMAANLHEAGEPMNATPPTTAPAALRTTPLTRDEAFTMLAGI--AQYFKQSEP 318

Query: 278 RGPAPEKLKR 287
           + P P  ++R
Sbjct: 319 QSPVPYLIER 328