Pairwise Alignments

Query, 517 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

Subject, 487 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 102/462 (22%), Positives = 172/462 (37%), Gaps = 41/462 (8%)

Query: 35  YECLESELTKAQSIHGTRQPDWHKILETSERLLRQQSKDLRVVVWMTWALYQRESYPGLL 94
           Y+ ++ E+ K   +      DW  I + S + L QQ K LR+V  ++ A  +   +    
Sbjct: 35  YQAIDQEMVKLGGLQEA-SIDWVYIEDASRQYLSQQCKHLRIVAHLSAAWLRSGCWEQWG 93

Query: 95  AGLGLLRYLCEHHWVESYPEKLRTRSAAFAWLVLRIEPLFAQGLP-------LQNQQLLF 147
             L LL  + E +W  ++P+           LV  +    A+ LP               
Sbjct: 94  CTLALLAGMLECYWEAAHPKPGPKGFLGKRKLVALVIDRLAEALPRLDRFTYTPTHAAAA 153

Query: 148 RAVLEHLTSLE--ELWGRHLGDDAPLLLPIRRQLAQRLEQALQADAPA-----AGLSGVI 200
           +A L+ L   E  +L    LG +   LL    +LA  + +A    APA     A L+ VI
Sbjct: 154 QAALKRLQQQETVQLDTAALG-ELERLLGKYSELANGVGEAAVPKAPAATEKPAPLADVI 212

Query: 201 AQVKQATSQLLKSEPVVDNEKDAGKLLRTLQEQARPLCAWWLRQNATDLRALRLNRTLNW 260
           A      S        + NE++  + + ++ E          +Q+  D    +L R   W
Sbjct: 213 ATPVSRMS--------MGNERETRRAVLSMAELIN-------QQDPYDATGYQLRRFGLW 257

Query: 261 LVLSGYPDADSERVTTLRGPAPEKLKRYQERFA-QGHHADLVLELEASLAGAMFWFDGLH 319
             +   P       T L     +  + Y+E  A +     L+  +E SL    FW  G  
Sbjct: 258 AHIQVAPQVRQGNRTELMAVPLDITRFYEEAIASKAVDPALLQRIEKSLTACPFWIRGSF 317

Query: 320 MLWQCLEALRAEQAMIELEVTFALLLQRLPDLPSFCFHDGIPFADAASRDWITLQVSRHL 379
           +       L   +    +    A  +QR+P L   CF DG+ F D     W+     +  
Sbjct: 318 LAATVATQLAMCEVAEAIRCATARFVQRMPSLQQLCFSDGMVFVDDQCLAWL-----KGT 372

Query: 380 QTPESAAVVIDTEAEPWESALQAVAPRLRQDGLKAAIHELKQGMYAARSERARFHWRLAQ 439
           Q P           + +    + +  +L   G++  +  L+      R+ R R H  +  
Sbjct: 373 QGPSGQGAT----PQEFSGLREELVSQLETGGIEPLLLRLQGLQAGVRAPRERCHTTVIA 428

Query: 440 ARLCVQAGKHELAKIQLEHLDHELQHTGLEHWEPELALQVTQ 481
           A L    G   LA+    ++   +Q T    WEPE+  ++ Q
Sbjct: 429 ADLLAARGVSWLAQDLCANVARTMQQTTASAWEPEVFERLQQ 470