Pairwise Alignments

Query, 517 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

Subject, 478 a.a., type VI secretion system protein TssA from Dickeya dianthicola ME23

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 117/463 (25%), Positives = 178/463 (38%), Gaps = 35/463 (7%)

Query: 35  YECLESELTKAQSIHGTRQPDWHKILETSERLLRQQSKDLRVVVWMTWALYQRESYPGLL 94
           +E +E+ L K  S+  + Q D + +      LL  ++KD+RV+V +   L          
Sbjct: 30  WEKVETALVKLGSLAHS-QVDLNAVAGQCLTLLESRTKDMRVLVQLLRCLQHPAKATPFA 88

Query: 95  AGLGLLRYLCEHHWVESYPEKLRTRSAAFAWLVLRIEPLF------AQGLPLQNQQLLFR 148
             + LL    E +W  ++P     +      ++ R E +       A G  L     L  
Sbjct: 89  TAIMLLDSWLEAYWTLAFPASAVQKQKLMVQIIRRFEGVLPRVAENASGAELSQLHQLAE 148

Query: 149 AVLEHLTSLEELWGRHLGDDAPLLLPIRRQLAQRLEQALQADAPAAGLSGVIAQVKQAT- 207
            +     +L       L D+    L   RQ  Q  E+A QA  PA+G  G  +    A  
Sbjct: 149 QLAARWRTLAADKAE-LTDELAASLHRARQRHQAQEKANQAAEPASGGPGGTSGGDAAAG 207

Query: 208 -----SQLLKSEPVVDNEKDAGKLLRTLQEQARPLCAWWLRQNATDLRALRLNRTLNWLV 262
                S    +   VD      +  +  Q     L A   RQ    +   RL R   W  
Sbjct: 208 GGNGGSGTASAAATVDINSSDDRHWKQTQLTVAALLAE--RQPEAPV-GYRLRRNAVWAG 264

Query: 263 LSGYPDADSERVTTLRGPAPEKLKRYQERFAQGHHADLVL--ELEASLAGAMFWFDGLHM 320
           ++  P A     T L   +P+++  Y    AQ   ADL L  ++E SL  A +WFDG H+
Sbjct: 265 IATPPPAARGNKTQLAPVSPDRVDEYHSALAQ---ADLALWNKIEQSLTLAPYWFDG-HL 320

Query: 321 LWQCLEALRAEQAMI-ELEVTFALLLQRLPDLPSFCFHDGIPFADAASRDWITLQVSRHL 379
           L   +       A+   +    +  L RLP+L    F DG PF  A    W        L
Sbjct: 321 LSATVATRLGHSAVAGAIADELSAFLARLPELRELAFSDGSPFLSAKCAQW--------L 372

Query: 380 QTPESAAVVIDTEAEPWESALQAVAPRLRQDGLKAAIHELKQGMYAARSERARFHWRLAQ 439
           Q+ +SA        +  +      A    + GL AA+  L + +   +  R RF   L  
Sbjct: 373 QSAQSAR---GGGGQRQDDLAAEAAACCAEQGLGAALSLLDERIRRLKEPRERFCAELVL 429

Query: 440 ARLCVQAGKHELAKIQLEHLDHELQHTGLEHWEPELALQVTQL 482
           A L  + G   LA    +HL  E +  GL  WEP +  ++ +L
Sbjct: 430 ADLLAEEGMKALAAQHYQHLWQESERLGLMQWEPGMVSRLERL 472