Pairwise Alignments

Query, 165 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 191 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 80.9 bits (198), Expect = 1e-20
 Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 4/150 (2%)

Query: 12  RINITFKPAVGGAQEEVELPLKLLVLGDFTQR--EDVRKLEDRKPIAIDKNTLDDVLAKQ 69
           R++IT+   +G A E+ ELP  + VLGDF+    E + KL+DRK + ID++  + VL   
Sbjct: 30  RVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPPEPLPKLKDRKFVYIDRDNFNGVLKGI 89

Query: 70  ALSLTLNVPNRLQEDADVEELAIQVSINSMKDFNPANLVEQVPELHKLMALREALMALKG 129
              LT  V N L ++    +L ++++ NS++DF P N+V+QV  L KL+ +R  L  L+ 
Sbjct: 90  KPRLTYRVDNTLAKNGT--QLGVELNFNSLEDFEPQNVVKQVEPLRKLLEVRNKLADLRN 147

Query: 130 PLGNTPSFRKAIEQALADDDSRARVLAELG 159
            +G      + +   L + +    +  E G
Sbjct: 148 KMGGNDKLEELLMDVLQNTEKLKTLGKEFG 177