Pairwise Alignments

Query, 595 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 606 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  272 bits (696), Expect = 3e-77
 Identities = 204/620 (32%), Positives = 317/620 (51%), Gaps = 51/620 (8%)

Query: 6   YYQSELSALRQLGRQFSERNPALAPFLAEAG---QDPDVERLLEGFAFLTGRLRQKLDDE 62
           YY+ ELS LR LG++F+ + P +A  L   G   +DP  ERL+E F+FL+ R+ +KLDDE
Sbjct: 8   YYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDE 67

Query: 63  LPELTHSLMHLLWPNYMRPMPAFSMLQFDPLKHSGPDVC--VARGTPVESAAVNGERCRF 120
            PE+  S + +L+P+Y+RP P+ S+++    +H        VAR T + +  V G  C+F
Sbjct: 68  FPEIVESFLEVLYPHYLRPTPSMSIVELSLGRHEKVTEAYRVARHTEMHANPVEGVVCKF 127

Query: 121 RTCYATQVLPL---RLSALEYGSRAGRG-----MLSLRLEMSAEGN--FSEWTLNRLRLH 170
           RTCY  ++ P+   + S  E    A  G     +  LR+ ++A G+  F +  +NRLR  
Sbjct: 128 RTCYPVELWPIAVQQASFTEMERSAFNGHSADLVARLRIRLAATGDALFGQMDMNRLRFF 187

Query: 171 FAGDRYISQELYLGLLRHLEGIELLPLGHDGLPVNGVDGQALSLRLGADQVQPVGFSEEQ 230
             G+  +  +LY  L  +L       L  D        G++  + L AD ++ VG++ ++
Sbjct: 188 LDGEATLMLQLYELLFNNL---AKATLSFDD------QGRSREVALPADALKTVGYARDE 238

Query: 231 ALIPYPQNTFPGYRHLQEYFAFPDKYLFVDVGGLG-VLQELPVELLKQVSGVMLRFELRS 289
            L+ Y + +F GYR L EYF FPDK++F D+ G   +LQ   +E + +V+     ++L  
Sbjct: 239 GLVDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILQGKAIEQV-EVNFYFSDYDLSE 297

Query: 290 PWGESRQPT-LENVKLYCTPIVNLFKHDAVPIRLDGKQDEYLLVPGEYSRENASVFSVDS 348
                 Q     N KL CTPI+NLF+  A PI+L   Q EY + P       A V S+D 
Sbjct: 298 RLARLTQNIGRNNFKLNCTPIINLFRQQAEPIKLTHTQHEYQVTPDTRLHNAAEVVSIDR 357

Query: 349 VTGWQP--GGRGYKTYVPFESFEHDVDNDLSDGPASYSIRQRPSTQHAGLETWLAFGNG- 405
           V   +   G     T  PF  FE        D  +S+ + +R +   A   +        
Sbjct: 358 VRRVRKLGGIDQVATCQPF--FE---PRGEQDPHSSFWVARRRNQGDATAMSIRVVDRDL 412

Query: 406 --PGSAQQTLSIELTCTNHNLPRLL----QLGDINLPCEQTPEGLSFRNICAPTASFPPP 459
               ++  TLSI LTC+N ++P +L    + GD  +P     + +  R +  PTA+   P
Sbjct: 413 ELIDASSDTLSIGLTCSNRDVPLMLPFGGERGDFTIPANSVIKDI--RCLRKPTATVRVP 470

Query: 460 LDQDFLWRLISNLSLNYLSLSDINALKVILQTYDLPRYHDRQAQKISERKLGAMRSVSHT 519
           L +  +WRLI++LSLN+LSL      +V+L+   L  Y+ R    I ++  G     S  
Sbjct: 471 LGKGLIWRLIAHLSLNHLSLVS-QGREVLLELLSL--YNYRNVSAIRKQINGIKAISSEP 527

Query: 520 AVDRLHRGLP--FRGIRIDLSIDPQGFLGHGEVFVFASVLNEFFALYASLNAYHELRVTS 577
            V R+    P   RG+ I L++D   F+G G VF+F  VL+ FF  Y S+N++ +L + +
Sbjct: 528 VVARIGHPRPNFVRGVGITLTLDESQFIGSG-VFLFGRVLDHFFGQYCSMNSFTQLTLRT 586

Query: 578 TQGD--VYLWPPRMGQQPLL 595
            Q +  V  WP R G QPL+
Sbjct: 587 QQREKRVVQWPARTGDQPLV 606