Pairwise Alignments

Query, 337 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 391 a.a., T6SS component TssG (ImpH/VasB) from Variovorax sp. SCN45

 Score = 73.9 bits (180), Expect = 6e-18
 Identities = 80/306 (26%), Positives = 123/306 (40%), Gaps = 14/306 (4%)

Query: 28  VLQVIKRL--RVAHPLLDEDA--LYDLLEFHANPGLGFPGHDIDRVEFFIEHEQLRARLR 83
           +  +++RL  R  HPLL      + + L     P + F   ++  V+     +    R+ 
Sbjct: 65  LFMLLRRLDARSDHPLLGRAPRPVDEPLRLGQEPSMAFAPSNVAGVD---ASQDGPPRIS 121

Query: 84  LNLLGLCGAGSPLPAFYGEQACADGV--GGNTTRDFLDVFHHRLQRLMLPVWRKYRYRAR 141
           +   GL G   PLP    E A         +T   F D+FHHRL  L    W   +    
Sbjct: 122 IYGFGLFGPNGPLPLHMTEYARERKRHHADDTLSAFADLFHHRLILLFYRAWADAQSVNS 181

Query: 142 FQAGARDTFSEQMFALIGLSGQQIRSIARLNCERLLPYLGMLGLRSHSASLIETVLRYYF 201
                   F + + +L+ +    ++   R+         G L  ++ +   +  +LR YF
Sbjct: 182 LDRPDGHRFVDYVASLMNMGQPGLKGRDRIADHARTFMAGHLVRQTRNPEGLIQILRLYF 241

Query: 202 KHHRLFIEQWVLRTVVIDDPQRNRLG--NANSVLGHDQVLGCRVADRSGKFRVHLQGLGW 259
               + IE++V   V ID+ Q + LG    N  LG    +G  V D   KFRV L  L  
Sbjct: 242 DVP-VRIEEFVSDWVRIDERQLSTLGFSGRNHQLGGGATVGIAVRDAQSKFRVELGPLSQ 300

Query: 260 QQLHGFLPTGADYPLLCSLVRLTARDPLEYDLRLVLAKEEIRPLHIGEHNVCGLGWTSWL 319
           Q+    LP       +   VR        ++LRLVL K++   + +G      LGW SWL
Sbjct: 301 QEFQELLPGSKRLRQVVDWVRQYVGIEFAWELRLVLRKQDAHGMQLGAGQ--QLGWGSWL 358

Query: 320 AHECAD 325
               AD
Sbjct: 359 GTRLAD 364