Pairwise Alignments

Query, 337 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 337 a.a., T6SS component TssG (ImpH/VasB) from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 19/318 (5%)

Query: 12  LTRLSLSIREYSLFQAVLQVIKRLRVAHPLLDEDALYD--LLEFHANPGLGFPGHDIDRV 69
           +  LS   ++++LFQA+  + +    A P+       +   +  HA   L F   D+  V
Sbjct: 2   IEELSARPQDFNLFQAISLLERAAPDAVPVGRSQGPREREAVRLHAFVSLAFEASDVREV 61

Query: 70  EFFIEHEQLRARLRLNLLGLCGAGSPLPAFYGEQACADGVG-GNTTRDFLDVFHHRLQRL 128
           +      +  + L    L L G+G PLP    E          + T DFLD+F+HR    
Sbjct: 62  DTDAPTGEPFS-LTTPALSLGGSGGPLPMPVTEMLLERRQRRDHATADFLDIFNHRFLAF 120

Query: 129 MLPVWRKYRYRARFQAGARDTFSEQMFALIGLSGQQIRSIARL--NCERLLPYLGMLGLR 186
           +    RK+       + +  T +  + A   L    +RS  R        L + G+LG  
Sbjct: 121 LYRSRRKHHVALNPHSPSSSTLASTLDAASALG---LRSGVRAPDGSALWLRHAGLLGGA 177

Query: 187 SHSASLIETVLRYYFKHHRLFIE----QWVLRTVVIDDPQRNRLGNANSVLGHDQVLGCR 242
               + +  +LR      RL ++    Q+  R + ++     RL +  + LG   VLG R
Sbjct: 178 PRGMTALLALLR-----DRLGVQVQGTQFRGRWLALEPDASARL-DMRTPLGGGAVLGKR 231

Query: 243 VADRSGKFRVHLQGLGWQQLHGFLPTGADYPLLCSLVRLTARDPLEYDLRLVLAKEEIRP 302
           V D+    R+    L  Q+L   LP GAD+ L   LVR      L+ ++ L LA  E R 
Sbjct: 232 VWDQGAGIRLTFSDLSQQRLRDLLPRGADHALAKWLVRRFIPQDLKVEMELQLAPAERRS 291

Query: 303 LHIGEHNVCGLGWTSWLA 320
             +G  N   LGWTSW+A
Sbjct: 292 SLLGAANPMRLGWTSWVA 309