Pairwise Alignments

Query, 810 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 873 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Variovorax sp. SCN45

 Score =  454 bits (1167), Expect = e-131
 Identities = 307/812 (37%), Positives = 435/812 (53%), Gaps = 81/812 (9%)

Query: 13  LTAQARRDLVRAAERCLTRGGREVLVEDLLLALLEHQDGLLVRAMADAGIEAGELQATLQ 72
           LT + +  L  A    L      +    LL A+L   DG   RA+ +    AG     L 
Sbjct: 6   LTTKFQEALGDAQSLALGNDNAYIEPAHLLAAMLRQDDG--PRALLE---RAGVNVPGLT 60

Query: 73  PKGEASASRNP-VFALALVQW------LQQALMVAHVELRQAEVDHGALLLALLRHPLQY 125
              EA+  + P V    +VQ       L QA     ++     +     LLAL       
Sbjct: 61  QAAEAAIKKLPQVQGHDIVQVGPELGKLLQATEKEAIKRNDQFIAGELFLLALADSKADI 120

Query: 126 AGSAYQVLLSRLDVQRVHGFVLG-QAPCPGPAPTVDSLLERFTHDLTRQAREGRIDPVLC 184
             +A +  LSR  ++     V G Q      A      L+++  DLT +AR G++DPV+ 
Sbjct: 121 GKTAKENGLSRKSLEAAIDAVRGGQGVNSADAEGQREALKKYCMDLTERARLGKLDPVIG 180

Query: 185 RDAEIGQLIDILMRRRKNNPILVGEAGVGKTAVVEGLALRVVTAQVPEPLRDVRVLTLDM 244
           RD EI + I +L RR KNNP+L+GE GVGKTA+VEGLA R+V  +VP+ L+  RVL+LDM
Sbjct: 181 RDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDM 240

Query: 245 GLLQAGASIKGEFERRLKGVIDEVNASMKPVILFIDEAHTLVGAGAQAGASDAANLLKPA 304
             L AGA  +GEFE RLK V++E+       I+FIDE HT+VGAG   GA DA N+LKPA
Sbjct: 241 AALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPA 300

Query: 305 LARGELRTIAATTWSEYKKYFEKDPALARRFQPVLVGEPSVEQAVSILRGLVSVYERSHG 364
           LARGEL  + ATT  EY+KY EKD AL RRFQ ++VGEPSVE  ++ILRGL   YE  HG
Sbjct: 301 LARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHG 360

Query: 365 VYVRDDAVVAAAQMSARYLSGRQLPDKAVDVLDTACARLRTRRDTAPEALQRFYAEQAEG 424
           V + D A+VAAA++S RY++ R LPDKA+D++D A A+++   D+ PE + R      + 
Sbjct: 361 VQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQL 420

Query: 425 VRQHQAISRDRQE------GFPVDEQV-------------------LHGLNLRMETMESE 459
             + +A+ R++ E      G   DE V                     G     E ++  
Sbjct: 421 QIEREAVRREKDEASQKRLGLIEDEIVKLQKEIADYDEIWQAEKAQAQGSAQVREDVDKI 480

Query: 460 RQHLEQCWLEQ--------------PTSTQQVCPRLVAEVISGWTGIPV---EQLAFEHS 502
           +  +E+ W  +              P   +++     +E   G +  P     Q+  E  
Sbjct: 481 KFQIEE-WKRKGDFNKVAELQYGQLPALEKRLKEAEASEASKGKSSAPTLLRTQVGSEEI 539

Query: 503 ARVLGLADAL---------RARILGQE----HAVQALDRNLRAVA-------AGLNKVDA 542
           A V+  A  +         R ++L  E      V   D  + AVA       +GL+  + 
Sbjct: 540 AEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNR 599

Query: 543 PVGVFLLVGPSGVGKTETALALGDLLYGGERFVTTLNMSEFQEKHSLSRLIGAPPGYVGF 602
           P G FL +GP+GVGKTE   AL   L+  E  +  ++MSEF EKHS++RLIGAPPGYVG+
Sbjct: 600 PTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGY 659

Query: 603 GEGGVLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQIFDKGVANDGEGREIDFRNTLILM 662
            EGG LTEAVR++PYSVVLLDEVEKA P+V N+  Q+ D G   DG+GR +DF+NT+I+M
Sbjct: 660 EEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVM 719

Query: 663 TSNLGSECIGELCAGGQRPEMHVLQEAIRPLLRDHFKPALLARI-RVVPYYPVTGEILND 721
           TSN+GS  I +   G    E   ++EA+   L+++F+P  L RI   V ++ +  + +  
Sbjct: 720 TSNIGSPII-QAMVGKPSEE---IKEAVWDELKNYFRPEFLNRIDETVVFHALDAKNIES 775

Query: 722 LTRLKLERLGQRLSLRKLAFSYTPGLVAHMAE 753
           +  ++L+ L  RL+   L    +P  +A +A+
Sbjct: 776 IAAIQLKVLQARLAKMDLGLEVSPAALAEIAK 807