Pairwise Alignments

Query, 390 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  126 bits (317), Expect = 1e-33
 Identities = 111/410 (27%), Positives = 179/410 (43%), Gaps = 63/410 (15%)

Query: 28  IGRGVGCDWIIPDAHRLISSHHALVSYREGHYFLTDISSNGITVSGSMERLDKGQARLIT 87
           IGR    DW++PD  RL+SS H ++ Y++G Y+LTD S+NG+ +  +  R+ +G + L+ 
Sbjct: 30  IGRSSDNDWVLPDPERLVSSQHCVIQYKDGRYYLTDNSTNGVELVKAGIRMRRGNSELLQ 89

Query: 88  EGEVYQLGQLEIRARLVAN----ERRPFARNDLIPDDAFLGL---------DPLHALDRE 134
           +GE+ ++G  EI+AR+  N    + +PF  +     +A +G           P+ A   +
Sbjct: 90  DGELIRIGDYEIQARIDFNVQSIDSQPFTGDAPNSFEALMGAVVNTPAPVATPVIAPQFQ 149

Query: 135 QLC-VDSSAELDALDASTQVSPQS---HM------------------QGPVDRDHLVVPT 172
               +D+  +L    + T V P +   H+                  + PV    ++   
Sbjct: 150 GASSMDTLPDLFDFLSPTAVPPPTVPDHVPSEQHDFRPPTPVAMPVAEPPVVSGAVIPED 209

Query: 173 W-----------AAPD----RQVNPPEPVI-----AAPAASQAFWPQFAQALGLPLDTLD 212
           W           +AP     + V PP PV+      A +        F +  GL    LD
Sbjct: 210 WDLFGDAPAPVVSAPPLPTPQPVTPPPPVVESMLPVADSQQPDLLQAFLRGAGLDQLRLD 269

Query: 213 TPGREALAIKVAGLLRHAIEGLQQSLRTRDELNSEINV--ALVSPVLNIRNPLKVCADSQ 270
               EA    +    R  +EGL   LR R  L  E  +   ++ P  N  NPLK   ++ 
Sbjct: 270 KAQAEAQMESIGRSYRLMVEGLIDVLRARASLKGEFRMQQTMIQPAEN--NPLKFAPNAD 327

Query: 271 AAMASLLGTGESGELAAEQAVAEACRDLQVHQLAMVVACRAAVRGALAAFAPGQLLPCFE 330
            A+  LL  G    +A + AV ++  DL+ HQLA++    AA++  L+ F P QL     
Sbjct: 328 EALLLLLRHGNQAFMAPDLAVRDSFNDLRAHQLAVMAGVEAAIKHLLSRFEPAQLEERMG 387

Query: 331 REGKRPRFFT---EAAHWRSYQRHYRRLVDENSLGDQ-LLRNDFSNAYEE 376
           + G     F    +A +W+ +   Y  +  E     Q L   +FS AYEE
Sbjct: 388 KPGGLSSLFNGSRQAQYWQQFTELYSNISREAQEDFQDLFGREFSRAYEE 437