Pairwise Alignments

Query, 442 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 447 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  124 bits (311), Expect = 6e-33
 Identities = 122/448 (27%), Positives = 195/448 (43%), Gaps = 22/448 (4%)

Query: 6   VIWQEGMLLRPQHLQHNDRYYHRQLNRTRLLSSDA-WGFLTLDLDLQYLNLGKVVVNQAS 64
           V+W EGM L PQH Q+ D ++  QL    L S+   WG   L +D   L  G + + +  
Sbjct: 7   VMWSEGMFLLPQHFQYQDEFHQHQLAEATLRSTPFHWGVQALQVDEDALANGSLQLKRLK 66

Query: 65  GVLPDGSLFELSGAMEPLV----LQVPANAGRQAVYLALPLATE---NQVEVRRKEQSDV 117
            V PDGSL++ +   +PL     L+    A    VY AL L      N VE   + ++  
Sbjct: 67  LVFPDGSLYD-APQHDPLPAARDLKDLLKANDLKVYAALKLPEPFGLNYVEDGHEHKA-- 123

Query: 118 LARYVACETEIGDSNAGADSRCQINCARPDLRLMLGEGPSDAFYVKLQVAQVQDSTREDG 177
             R+      + D N G +   +I   R ++ L++ +G S   Y    +A++  ++   G
Sbjct: 124 ARRFRKQFDTLPDLNEG-ELENEITSLRLNVVLLV-DGDSLDGYSHCPLAKLTRNSM-GG 180

Query: 178 VSLDADFVPTFIYLQGTGYVSSCIKEVISLLATRGDAIAARIQGSGASTGAQVGD----- 232
            +LD  FV   ++L     ++   K ++  L  +  A++ R +   A   A+ G      
Sbjct: 181 FNLDPHFVHPTLHLGSHETIAGIGKRLLGALQAKSKALSGR-RRERADQIAEFGSSDVTL 239

Query: 233 FLMLQLINRAELILRHYLVQAQVRPERLYRELLSILGELSTFANDNKRAQLAVHYRHGDQ 292
           F +L  +NRA   L H L   ++ PERLY  L  + G L TF  D + + +   Y H D 
Sbjct: 240 FWLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQLSDIP-EYDHHDP 298

Query: 293 GASFRGLMEGLRTVLSSVLEQHAIELVLQQRQYGVLVCPVSDLKLLGTATFILAATAQCD 352
            AS   L E +R +L +V+    I + L Q +       + D +L   A F +A  A   
Sbjct: 299 AASLVKLDEMIRVMLDNVVPNQCIVINLTQTKPSHWQGQLHDPRL-AEADFYIAVHADMP 357

Query: 353 SEELRHRLPAHLKIGPVERIRELVNLHLAGIKVQPLPVAPRQIPYHAAKTYFMLELSPRD 412
              L   +P   K+G  E I  +VN  + G+ +      P  IP      YF +E     
Sbjct: 358 GASLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFAIEPHGTV 417

Query: 413 IAQLEQSGGFAFHASGEFAELELNFWAI 440
             ++  +    F+A   F  L+L   A+
Sbjct: 418 YERMISAQAICFYAPSAFTNLKLELMAV 445