Pairwise Alignments

Query, 1111 a.a., type VI secretion protein VasK from Pseudomonas simiae WCS417

Subject, 831 a.a., OmpA domain protein from Pseudomonas putida KT2440

 Score =  166 bits (421), Expect = 5e-45
 Identities = 134/497 (26%), Positives = 215/497 (43%), Gaps = 57/497 (11%)

Query: 94  EEIRQVRARFKEALQALKTSRRYGERSERWRDELPWYLLIGEQGSGKTSLLAASGLPSPF 153
           EE+  +R R  + ++ L +++  G  ++     LPWYL+IG+  +GK++++  SGL  P+
Sbjct: 91  EEVSLLRERLLQGIERLHSNKPRGTSNKDALYALPWYLVIGQPAAGKSTMILQSGLNFPY 150

Query: 154 DHPDA---APLGAASWCDWYFAEDAVLVEAAGRYLGQPDPSVDAAGWSTLLDLLKWRRRS 210
              +    A LG    CDW+F+ +AVL++ AGRY+  P+   +A  W   L LL+  R+ 
Sbjct: 151 AEREGVRVAGLGGTRNCDWFFSSEAVLLDTAGRYMNSPE---EAGKWRGFLQLLRQHRQR 207

Query: 211 RPLNGVVVTLSADTLSSSNEHDLERHARHVRTRLQDIQQTLHVDVPVYLVLTQSDRLAGF 270
           RPLNG++V++S   +   +  D ER A+ +R R+Q+    L V +P+YLV T+ D + GF
Sbjct: 208 RPLNGLIVSVSIADILHGSVEDQERVAKRLRERIQESCALLEVRLPIYLVFTKCDLIPGF 267

Query: 271 AEFFDAQQGDGTEQVLG---GDLGTDLAQVRDVFENL---LQRLGGDLIPR--LHQERNV 322
             F+         +V+G      G + A     F N    L R  G +  +  + Q+  V
Sbjct: 268 TAFYRQLDDAARGEVMGKTFSHKGYEQADWGQRFSNAMDELTRYWGQMASQQLVQQDIQV 327

Query: 323 ERRGH-MLDFPRQVARIGDALCLFIEAAFSVNRNQPINALRGFYLTCAKTVD-------- 373
            RR      FP ++A +   L  F+++    N  Q    LRGFY T A   D        
Sbjct: 328 TRRNDAAYRFPLELAALKPRLHQFVDSLLRANPYQNAEMLRGFYFTAALQADEAQWGCHG 387

Query: 374 ---------------------VRPHFVQGLFKRVIFAEADQAGLLTPERQRIHRRHGWMA 412
                                  P F+  LF++VI  +     L T   +   R+ GW+ 
Sbjct: 388 QHVAERFALEHAEGTGTAGSQPAPLFINSLFRKVIIPDQHLVALYTSNHRERRRKAGWVG 447

Query: 413 LAATVVIGTVGAVWAHSYSFNHQRLLQLTGLIHTQTGTPPGADESHALLTLLDSRLAATQ 472
            A    +  + ++W  SY  N   L  +   +         A   +     LD       
Sbjct: 448 AAGLAAL-VLCSLWGWSYLNNRATLASIADELAQAKADDQAASGQYTAWRSLDRLRFWAA 506

Query: 473 VFSPQAQARWID---RAGLYQGALSIAPLAAAYEHTLQQRFLPYVATVLEGRVRGSLGDR 529
            +  Q  A+ +    R GLYQG   + PL       L+ R+   +  V+      +L   
Sbjct: 507 HYHEQHHAKGVPLGMRLGLYQGH-EVEPL-------LRDRYFATLQNVMLKPTADNLTRT 558

Query: 530 EQLLDNLRAYLMLNLRE 546
             LL  L+ Y   N RE
Sbjct: 559 LYLLTTLKVY-QRNTRE 574