Pairwise Alignments

Query, 841 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  117 bits (293), Expect = 1e-30
 Identities = 101/354 (28%), Positives = 166/354 (46%), Gaps = 30/354 (8%)

Query: 164 DAGFLGMIIPKQYGGKGFSHYAHSQVVMKLSTRCSAAAISVMVPNSLGPAELLLHYGTDA 223
           D G +   +P++YGG G      + +  +L  R S     ++  N++     LLH+GTD 
Sbjct: 46  DMGLMQARVPEEYGGPGLD-LTTTCMAKELVARVSMTGAQLINQNTISFVLPLLHFGTDE 104

Query: 224 QRNYYLPRLARGEDIPCFALTSPYAGSDAGAIPDLGIVCKGTHEGEEVLGFRVTWDKRYI 283
           QR  +LPR+A+G  +   A+T P+AGSD GA+     V +G H       + V   K +I
Sbjct: 105 QRRKWLPRVAKGGVVSSVAITEPHAGSDVGAM-KTNAVREGDH-------YVVNGQKCFI 156

Query: 284 TLGPIATVLGLAFRAEDPDGLLGAPGSLGITCALIPTSHPGVNSGRRHWPLNAVFQNGPT 343
           T+ P+A  + L  +     G +   G   I+C ++     G+  G        + Q G T
Sbjct: 157 TMAPLADYITLFAKT----GEVNRRGVDNISCFIVDMKSAGITLGGSE---KMMGQRG-T 208

Query: 344 TGKDVF-----IPLEWVIGGREQVGNGWRMLMECLAAGRAISLPSANVGLGKVAVRGTTA 398
              D+F     +P+E  +G   + G G+   M  L   R     SA VG+ + A     A
Sbjct: 209 PHADIFFDNVRVPVENRMG---EEGRGFISCMHILDLNRPTVAASA-VGVAQGAFDIAVA 264

Query: 399 YAAMRKQFGLPIGKFEGVQAPLARMAGHLYACDAVRKVSVASLDAG--EKPSVISAIAKY 456
           YA  RK FG  IG+F+G+Q  LA M   + A  A+      ++DAG  ++ + ++++ K 
Sbjct: 265 YAKERKAFGKAIGEFQGLQFMLADMHIQIEAARALLYKCTRAIDAGQHDRLTEMASMVKC 324

Query: 457 HVTERARIIVNDGMDIVAGKGICMGPNNFLARAYQQSPIAITVEGANIMTRCLI 510
             T+ A  +  D + ++ G G   G  N + R  + + +    EG N + R +I
Sbjct: 325 FCTDVAMKVTTDAVQVLGGHGYIRG--NHVERMMRDAKVLQIYEGTNQIQRMVI 376