Pairwise Alignments

Query, 342 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 348 a.a., Ycf48-like protein from Alteromonas macleodii MIT1002

 Score =  141 bits (356), Expect = 2e-38
 Identities = 106/300 (35%), Positives = 149/300 (49%), Gaps = 43/300 (14%)

Query: 17  LAAALSLFGAVALPTVVQAASDTSFAIESPKAAKGLMIDVVHAGKRLVAVGDRGHILYSD 76
           +AA ++   AV   T   A      A  +P   + +++D+  A   +V VG+RGH+L S+
Sbjct: 5   IAACIAATFAVNYSTTAIAEE----AFMAPLVEQSVLLDI-DADTFVVIVGERGHVLVSE 59

Query: 77  DQGSTWTQAKVPTRQLLTAVFFIDDKQGWAVGHDAQILSSSDGGATWTQQYQDLKREAPL 136
           D G  +TQ  VPT+  LTA   + D   WAVGHDA IL SSD G TW  Q      + P 
Sbjct: 60  D-GEAFTQKAVPTQSTLTATTVVGDNI-WAVGHDAVILHSSDKGETWEIQNFQPDLQRPF 117

Query: 137 LDVWFNDANHGLAVGAYGALIETTDGGKTW-----------------EDVSDRLDNEDQY 179
           LDV F +   G+A GAYG    T DGGKTW                 ED+  R ++ED Y
Sbjct: 118 LDVLFFNEKQGIATGAYGLFYRTLDGGKTWTAERHASLLDPMDQEYLEDI--RKEDEDFY 175

Query: 180 ---------HLNAIASIKDAGLFIVGEQGSMFRSSDDGQTWEKLEGPYEGSLFGVISTAQ 230
                    HLN I    D  L++ GE G + +S++ G++WE+    Y GS F  I    
Sbjct: 176 QQELESILPHLNRITLDGDT-LYLAGEAGLLAKSTNMGESWERYYVDYTGSFFD-IKPLD 233

Query: 231 PRTLLAYGLRGNLYRSTDFGSTWEQVELNAARGALEFGLSGATLLEDGSIVVVGNGGSVV 290
             T+LA GLRGN++ + + G  WE V+   +   L   L G+    +  +  +GN G +V
Sbjct: 234 ENTVLAVGLRGNIFVNRNEGE-WEYVQ-TCSTSTLNSILIGS----ESKVYALGNNGMMV 287