Pairwise Alignments

Query, 791 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 869 a.a., putative Transporter from Pseudomonas putida KT2440

 Score = 94.7 bits (234), Expect = 2e-23
 Identities = 135/649 (20%), Positives = 253/649 (38%), Gaps = 59/649 (9%)

Query: 161 VGRLVANDFKSSIVDIPLLESYPDPQDQGKLLALDYRKFSHELEDKIRTKFQEQNPNV-- 218
           VG +V+ D K ++V   L     D Q Q +          H++ + I  K+Q  +P    
Sbjct: 216 VGGVVSADKKVAMVVAELGTKQDDAQAQLRAY--------HQVREII-AKYQAAHPEFTD 266

Query: 219 QIHIVG---FAKKVGDLIDGLIMVVLFFGVAFGITLVLLLWFTNCLRSTIAVLSTTLVAV 275
           ++ I G   F     ++ID  +   + F + F +   LL++F       +  L   L   
Sbjct: 267 EVFIAGMPIFIAAQQEIIDHDL--AMLFPIVFLLVTSLLVFFFRKPLGVVLPLFNILFCT 324

Query: 276 VWQLGLMHAAGFGLDPYSMLVPFLIFAIGISHGVQKINGIALQSSEADNALTAARRTFRQ 335
           +W LGLM      +D  + ++P  +F I  +  +  +     Q +   +   A R T R 
Sbjct: 325 IWTLGLMALLRVPMDLLTSVLPVFLFTICCADAIHVMAEYYEQLNSGKSFREANRETQRL 384

Query: 336 LFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVG--- 392
           +  P ++  +     F+     +I  IR   +  SIG+   +  +L+L+P  IS  G   
Sbjct: 385 MVTPVVLTTVTTIATFLISTTNNIVSIRNFGVFMSIGLTAALIISLLLIPAWISIWGKDA 444

Query: 393 ISKRAIAKSKKDANREHPFWRLLSKFASPKVAPVSVFLALIAFGGGLWYSQNLKIGDLDQ 452
           + ++   K    ++    F   L ++  P +      LA++            K+   D 
Sbjct: 445 VPRKVQLKESLISHYLVVFCAWLIRWRKPVLLVTLPLLAMMTVF-------TFKVDIEDS 497

Query: 453 GAPELRPDSRYNKDNNFI--ISNYSTSSDVLVVMVKTKAEGCSRYEAMAPIDQLMWKMQN 510
           G    + DS     + FI       TS   +    KT   G    E +  +D+L   ++ 
Sbjct: 498 GIAYFKKDSPVRMSDEFINRAGVAGTSPGWIAFDTKTP-RGALTTETVQFLDRLDQFIKA 556

Query: 511 TEGVQSAISLVTVSKQMIKGMNEGNLKWETLSRNP---------------DVLNNSIARA 555
              V    S+ T  K+M   +N+ N  +  + +                 DV  NS+   
Sbjct: 557 QPNVSYTYSVATYIKRMNLVLNDMNPAFLRVPQAVEQVTVVDDDGKPETFDVDGNSLIEQ 616

Query: 556 -------------DGLYNNNCSLAPVLVFLNDHKAETLDRAVHAVQDFAKENNKDGLEFI 602
                          + N + S A  L  +    A      +  +  +   N    L+ +
Sbjct: 617 HIMMFENGGGTDLQNVLNADYSKAVTLFTMTSSVAGDYQAMLDKLDAWLAINKPANLQ-V 675

Query: 603 LAAGNAGIEAATNEVIKESELTILILVYLCVATMCMITFRSWAATLCIVLPLVLTSVLGN 662
             AG   I     + I + ++    L  L V  M M   +S    +  +L L+ TSV   
Sbjct: 676 THAGTPYIWTGVLQEITQGQVLSFSLALLAVTLMMMFWLKSVRLGILGMLTLLTTSVTVY 735

Query: 663 ALMAFMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKSTGKA 722
             M  + I + + T  V  L VG+ VDY +++ SR++  ++ G+ + EA    ++  G++
Sbjct: 736 GSMYLLDIELNIGTTLVTFLVVGV-VDYAVHLLSRIKMLVQKGIEIDEAILAAMQGVGRS 794

Query: 723 VLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALA 771
            +   +  ++G    +FSA K   D+G+++   L  + F  + L+  ++
Sbjct: 795 TVVNVVIFSMGFVALLFSAYKPVIDLGVLVILALSSSGFMTILLVTLIS 843