Pairwise Alignments

Query, 791 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 799 a.a., adhesin-associated MmpL efflux pump (from data) from Pseudomonas putida KT2440

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 682/791 (86%), Positives = 737/791 (93%)

Query: 1   MSSHHNDKATFLERLIFNNRPAVIVICLLVSIFLFWQATLIRPSTSFEKMIPLKHPFIEK 60
           M  HH DKAT LERLIFNNRP VI +C+LVSIFLFWQAT IRPSTSFEKMIPL+HPFIE+
Sbjct: 9   MHPHHQDKATLLERLIFNNRPVVIALCVLVSIFLFWQATQIRPSTSFEKMIPLQHPFIEQ 68

Query: 61  MMEHRNDLANLGNTVRISVEAKDGDIFTKEYMETLRQINDEVFYISGVDRSGLKSLWSPS 120
           MMEHRNDLANLGNTVRISVEA +GDIF K+YMETLRQI+DEVFYI GVDR+GLKSLWSPS
Sbjct: 69  MMEHRNDLANLGNTVRISVEAVNGDIFDKDYMETLRQIHDEVFYIPGVDRAGLKSLWSPS 128

Query: 121 VRWTEVTEEGFAGGEVIPQSYNGSPESLDQLRNNVLKSGQVGRLVANDFKSSIVDIPLLE 180
           VRW+EVTEEGF+GGEVIP +YNGS +SLD LR+NVLKSGQVGRLV N+FKSSIVD+PLLE
Sbjct: 129 VRWSEVTEEGFSGGEVIPNTYNGSQDSLDTLRDNVLKSGQVGRLVGNNFKSSIVDVPLLE 188

Query: 181 SYPDPQDQGKLLALDYRKFSHELEDKIRTKFQEQNPNVQIHIVGFAKKVGDLIDGLIMVV 240
           SYPDPQD GK + LDY++FSH LE+KIR KFQ QNPNV+IHIVGFAKKVGDLIDGL+MV 
Sbjct: 189 SYPDPQDPGKQVKLDYQQFSHLLEEKIRDKFQAQNPNVKIHIVGFAKKVGDLIDGLVMVA 248

Query: 241 LFFGVAFGITLVLLLWFTNCLRSTIAVLSTTLVAVVWQLGLMHAAGFGLDPYSMLVPFLI 300
           +FFGVA  ITLVLL WFT C+RST+AVL TTLVAVVWQLGLMHA GFGLDPYSMLVPFLI
Sbjct: 249 MFFGVALVITLVLLYWFTWCIRSTVAVLITTLVAVVWQLGLMHAVGFGLDPYSMLVPFLI 308

Query: 301 FAIGISHGVQKINGIALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIG 360
           FAIGISHGVQKINGIALQSS+ADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIG
Sbjct: 309 FAIGISHGVQKINGIALQSSDADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIG 368

Query: 361 VIRELAIGASIGVAVIVFTNLILLPVAISYVGISKRAIAKSKKDANREHPFWRLLSKFAS 420
           VIRELAIGASIGVAVIVFTNLILLPVAISYVGISK+AI +SKKDA  EHPFWRLLS FAS
Sbjct: 369 VIRELAIGASIGVAVIVFTNLILLPVAISYVGISKKAIERSKKDATCEHPFWRLLSNFAS 428

Query: 421 PKVAPVSVFLALIAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNKDNNFIISNYSTSSDV 480
            KVAPVSV LAL+AF GGLWYSQNLKIGDLDQGAPELRPDSRYN+DNNFIISNYSTSSDV
Sbjct: 429 AKVAPVSVVLALLAFAGGLWYSQNLKIGDLDQGAPELRPDSRYNQDNNFIISNYSTSSDV 488

Query: 481 LVVMVKTKAEGCSRYEAMAPIDQLMWKMQNTEGVQSAISLVTVSKQMIKGMNEGNLKWET 540
           LV+MVKT +E CS +  MAPID+LMW M+NT GVQSAISLVTVSKQ+IKGMNEG+LKWET
Sbjct: 489 LVIMVKTPSEKCSVHSTMAPIDELMWTMENTPGVQSAISLVTVSKQVIKGMNEGSLKWET 548

Query: 541 LSRNPDVLNNSIARADGLYNNNCSLAPVLVFLNDHKAETLDRAVHAVQDFAKENNKDGLE 600
           LSRNPD+LNNSIARADGLYN +CSLAPVLVFLNDHKAETL+R     + FA  ++K+GL+
Sbjct: 549 LSRNPDILNNSIARADGLYNGDCSLAPVLVFLNDHKAETLERVTAVAKAFADSHDKEGLQ 608

Query: 601 FILAAGNAGIEAATNEVIKESELTILILVYLCVATMCMITFRSWAATLCIVLPLVLTSVL 660
           F+LAAGNAGIEAATNEVIK +ELTILILVY+CVA MC+ITFRS+AATLCIVLPLVLTSVL
Sbjct: 609 FLLAAGNAGIEAATNEVIKSAELTILILVYICVAVMCLITFRSFAATLCIVLPLVLTSVL 668

Query: 661 GNALMAFMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKSTG 720
           GNALMA+MGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTL+STG
Sbjct: 669 GNALMAYMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLRSTG 728

Query: 721 KAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEKL 780
           KAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEK+
Sbjct: 729 KAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEKM 788

Query: 781 AGQKGNSLFAH 791
            G++G S+FAH
Sbjct: 789 VGKEGGSIFAH 799