Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

Subject, 469 a.a., proline-specific permease from Pseudomonas simiae WCS417

 Score =  291 bits (744), Expect = 4e-83
 Identities = 170/452 (37%), Positives = 257/452 (56%), Gaps = 12/452 (2%)

Query: 5   QSSNDLEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMRM 64
           Q    L++GL  RH+  +++   IG GLF GS  AI  AGPAVLLAY   G  V +VMR 
Sbjct: 3   QQEKGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRA 62

Query: 65  LAEMAVASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAWFPDI 124
           L EMAV +P  GSF  YA   +G  AGF +GW Y +  ++V   +  A    +  WFPD+
Sbjct: 63  LGEMAVHNPVAGSFGQYASTYLGPMAGFILGWTYAFEMIIVCLADVTAFGIYMGFWFPDV 122

Query: 125 AIWVFTLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLA-AIFGF--LPTS 181
           A WV+ L I LL+   NL +VK +GE EFW +L+KV AIV  ++ G    +FG      +
Sbjct: 123 ARWVWVLGIVLLIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILGGFGIMLFGIHSAGET 182

Query: 182 QVSGVSHLFDTQGFMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATNSV 241
           Q SG+S+L+   GFMPNG+G ++A+    MF+F G EI+ I A E+K+P + I KA N+V
Sbjct: 183 QASGLSNLWAHGGFMPNGIGGLIASFAVVMFAFGGIEIIGITAGEAKDPQRVIPKAINAV 242

Query: 242 IWRIGLFYLLSIFIVVSLVPWNDPTLAAVGS-YQTVLERMGIPNAKLIVDLVVLVAVTSC 300
             RI LFY+L++F+++++ PW  P + + GS +  +   +GI +A  I+++VV+ A  S 
Sbjct: 243 PLRILLFYVLTLFVLMAIYPW--PQIGSQGSPFVQIFSNLGIGSAATILNIVVISAAVSA 300

Query: 301 LNSALYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLAVFANYVAPAAVF 360
           +NS ++ A RM++ L ++G AP    + +K G P+  V++   A    V  NY+ P  VF
Sbjct: 301 INSDIFGAGRMMYGLAQQGQAPKGFAQLSKQGVPWMTVVVMGAALLGGVVLNYLIPENVF 360

Query: 361 EFLLASSGAIALLVYLVIAVSQLRMRQ---KRTAAGEKIVFKMWLF-PGLTYAVMVFIVG 416
             + + +    + V+L+I  +Q+ MR+   K   A  K     W + P      M+F+ G
Sbjct: 361 LVIASIATFATVWVWLMILFTQVAMRRSMTKEQVAELKFPVPFWPYAPAAAIVFMLFVFG 420

Query: 417 TLTIMLFQEAHRIEIIATGVLSLLVVAAGLFV 448
            L    F +     ++    + LLVVA  L+V
Sbjct: 421 VLG--YFPDTQAALLVGAVWIVLLVVAYLLWV 450