Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

Subject, 469 a.a., GABA permease from Pseudomonas simiae WCS417

 Score =  577 bits (1487), Expect = e-169
 Identities = 292/463 (63%), Positives = 354/463 (76%), Gaps = 3/463 (0%)

Query: 1   MSSTQSSNDLEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVL 60
           ++S  S+  L QG KPRHVTMLSIAG+IGAGLFVGSGHAIAAAGPAVLLAY  +GTLVVL
Sbjct: 4   LNSNDSNGQLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVL 63

Query: 61  VMRMLAEMAVASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAW 120
           VMRML EMAVA+PDTGSFSTYAD+AIG WAGFTIGWLYWWFWVLVIP+EA AA  IL+ W
Sbjct: 64  VMRMLGEMAVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQW 123

Query: 121 FPDIAIWVFTLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLAAIFGFLPT 180
           FP I  W+F L+   LL  TNLFSV  YGEFEFWFA+ KV+AI+ F+ LG A + G++P 
Sbjct: 124 FPQIDAWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPE 183

Query: 181 SQVSGVSHLFDTQG-FMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATN 239
            +VSG+S L +  G F PNG+ AV+ A +T MFSF+GTE VTIAAAES NP Q I +AT 
Sbjct: 184 REVSGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATR 243

Query: 240 SVIWRIGLFYLLSIFIVVSLVPWNDPTLAAVGSYQTVLERMGIPNAKLIVDLVVLVAVTS 299
           SV+WRIG+FYLLSIF+V+S+VPWNDP LA+VGSYQ  LE M IP+AKL+VD+VVL+AV S
Sbjct: 244 SVMWRIGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVAS 303

Query: 300 CLNSALYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLAVFANYVAPAAV 359
           C+NS++Y ASRMLFSLG+RGDAPA+ K+T+ +  P  AV+ ST         +Y APA +
Sbjct: 304 CMNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAGL 363

Query: 360 FEFLLASSGAIALLVYLVIAVSQLRMRQKRTAAGEKIVFKMWLFPGLTYAVMVFIVGTLT 419
           F+FLLASSGAIALLVYLVIAVSQLRMR+        + F+MWLFP LT+ V+ FI   LT
Sbjct: 364 FQFLLASSGAIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVIAFICAALT 423

Query: 420 IMLFQEAHRIEIIATGVLSLLVVAAGLFVSSR--RKTQRAGAA 460
           +ML    HR E+ +T  L+L++   GL  + +  R  +  GAA
Sbjct: 424 VMLVTPEHRFEVSSTIGLALVISLVGLLTARQPERTQKTVGAA 466