Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  323 bits (829), Expect = 6e-93
 Identities = 171/457 (37%), Positives = 271/457 (59%), Gaps = 6/457 (1%)

Query: 4   TQSSNDLEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMR 63
           T     L++ L  RH+ ++++   IG GLF+GS  AI  AGPA++L+Y   G  ++++MR
Sbjct: 12  TAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMR 71

Query: 64  MLAEMAVASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAWFPD 123
            L EMAV +P  GSFS YA   +G  AGF  GW YW+ W++    E  A A  +  WFPD
Sbjct: 72  ALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPD 131

Query: 124 IAIWVFTLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLAAI-FGFLPTSQ 182
              W++ L   + + + NL +VK +GEFEFWFALIK+V I+  VI G+  I FGF     
Sbjct: 132 TPRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGV 191

Query: 183 VSGVSHLFDTQGFMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATNSVI 242
             G+S+L+   GFMPNG+  VL ++   MF+++G E++ + A E+KNP + I  A  SV 
Sbjct: 192 ALGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVF 251

Query: 243 WRIGLFYLLSIFIVVSLVPWNDPTLAAVGS-YQTVLERMGIPNAKLIVDLVVLVAVTSCL 301
           WRI LFY+ ++F+++S+ PWN+  +   GS +    ER+GI  A  I++ VV+ A  S  
Sbjct: 252 WRILLFYVGALFVILSIYPWNE--IGTQGSPFVMTFERLGIKTAAGIINFVVITAALSSC 309

Query: 302 NSALYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLAVFANYVAPAAVFE 361
           N  +++  RML+SL + G APA   +T+ +G P  A+LLS  A  L V  NY+ P  VF 
Sbjct: 310 NGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLVPEKVFV 369

Query: 362 FLLASSGAIALLVYLVIAVSQLRMRQKRTAAGEK-IVFKMWLFPGLTYAVMVFIVGTLTI 420
           ++ + +   A+  +L+I ++QL+ R+  + A +  + ++MWL+P  +Y  + F++  + +
Sbjct: 370 WVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFLLLVVGL 429

Query: 421 MLFQEAHRIEIIATGVLSLLVVAAGLFVSSRRKTQRA 457
           M +    RI +   G + L+++    +V   + TQ A
Sbjct: 430 MAYFPDTRIALY-VGPVFLVLLTVLFYVFKLQPTQVA 465