Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., aromatic amino acid transport protein from Pseudomonas putida KT2440

 Score =  297 bits (760), Expect = 6e-85
 Identities = 176/467 (37%), Positives = 263/467 (56%), Gaps = 22/467 (4%)

Query: 7   SNDLEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMRMLA 66
           S +L++GLK RH+ ++++ G IG GLF+GS   + +AGP+++L YA  G +  ++MR L 
Sbjct: 8   SGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVMKSAGPSMILGYAICGFIAFMIMRQLG 67

Query: 67  EMAVASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAWFPDIAI 126
           EM V  P  GSFS +A    G +AGF  GW  W  ++LV   E +A    +H W+P+I  
Sbjct: 68  EMIVEEPVAGSFSHFAHTYWGGFAGFLSGWNCWVLYILVGMSELSAVGKYVHYWWPEIPT 127

Query: 127 WVFTLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLAAIFGFLPTSQVSG- 185
           WV      +L+ A NL +VK +GE EFWFA+IKVVAIV  + LG      +L TS   G 
Sbjct: 128 WVTAAAFFVLINAINLMNVKFFGEAEFWFAIIKVVAIVSMIGLG-----AYLLTSGSGGP 182

Query: 186 ---VSHLFDTQGFMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATNSVI 242
              V++L+   GF PNG+  ++ A+   MFSF G E++   AAE+  P   I KA N VI
Sbjct: 183 EATVANLWTHGGFFPNGVSGLVMALAFIMFSFGGLEMLGFTAAEADKPKTVIPKAINQVI 242

Query: 243 WRIGLFYLLSIFIVVSLVPWNDPTL---AAVGSYQT-----VLERMGIPNAKLIVDLVVL 294
           +RI +FY+ ++ +++SL PW++      A+ GSY +     V   +G   A  +++ VVL
Sbjct: 243 YRILIFYVGALVVLLSLTPWDNLVASIDASGGSYGSSPFVQVFSLLGSDVAANLLNFVVL 302

Query: 295 VAVTSCLNSALYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLAVFANYV 354
            A  S  NS  Y  +RML  +  +GDAPA   + +K G P  ++L+S    F+AV  NY+
Sbjct: 303 TAALSVYNSGTYCNARMLLGMAEQGDAPASLAKVDKRGVPVRSILVSAAVTFVAVLLNYL 362

Query: 355 APAAVFEFLLASSGAIALLVYLVIAVSQLRMRQKRTAAGEKIVFKMWLFPGLTYAVMVFI 414
            P    E L++   A  ++ + +I+ S L+ RQ     G+K +FK   +P   Y V+ F+
Sbjct: 363 MPQNALELLMSLVVATLVINWAMISYSHLKFRQHLDRTGQKPLFKALWYPYGNYVVLAFV 422

Query: 415 VGTLTIMLFQEAHRIEIIATGV--LSLLVVAAGLFVSSRRKTQRAGA 459
           V  L IML     ++ + A  V  L++LVV     V SRR+    GA
Sbjct: 423 VLILGIMLMIPGIQVSVYAIPVWLLAMLVV---YMVKSRRQVNAGGA 466