Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

Subject, 460 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

 Score =  535 bits (1379), Expect = e-157
 Identities = 268/442 (60%), Positives = 334/442 (75%)

Query: 5   QSSNDLEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMRM 64
           +    L+ GL  R V+M+SIAG+IGAGLF+GS +AIA AGPA+L++YA  G LV+LVMRM
Sbjct: 7   KKQRSLQHGLTSRQVSMISIAGIIGAGLFIGSSNAIATAGPAILISYAMTGLLVLLVMRM 66

Query: 65  LAEMAVASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAWFPDI 124
           L EMA+A+P++GSFSTYA  AIG WAGFTIGWLYWWFWVL+IP+EA A A ILHA+FP +
Sbjct: 67  LGEMAIANPNSGSFSTYASEAIGPWAGFTIGWLYWWFWVLIIPVEAIAGADILHAYFPGV 126

Query: 125 AIWVFTLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLAAIFGFLPTSQVS 184
             W+F  +I L+L+ TNL SVKN+G FE+WFAL+KVVAI+GF+ +   A+FGF P ++VS
Sbjct: 127 PSWLFAFLIMLVLSGTNLVSVKNFGAFEYWFALVKVVAIIGFIGVCTLAVFGFWPLAEVS 186

Query: 185 GVSHLFDTQGFMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATNSVIWR 244
           GVS L+D+ GFMPNG G VL  +L T+FSF G EIVTIAA E+ NP  +I +ATN V++R
Sbjct: 187 GVSRLWDSGGFMPNGFGTVLGGVLITIFSFFGAEIVTIAADETANPKDKIRRATNLVVYR 246

Query: 245 IGLFYLLSIFIVVSLVPWNDPTLAAVGSYQTVLERMGIPNAKLIVDLVVLVAVTSCLNSA 304
           I +FYL SIF+VVSLV WNDP L AVGS+Q VLE + +P AKL+VDLVVLVAVTSC+NS 
Sbjct: 247 IAIFYLASIFLVVSLVAWNDPGLKAVGSFQRVLEVLNVPGAKLLVDLVVLVAVTSCMNSG 306

Query: 305 LYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLAVFANYVAPAAVFEFLL 364
           LYTASRML+SLG RG A +V KR + SG P  AV+ ST A F   F NYV P  VF FLL
Sbjct: 307 LYTASRMLYSLGARGQALSVTKRISGSGVPTVAVIFSTLAGFAGCFVNYVFPGKVFGFLL 366

Query: 365 ASSGAIALLVYLVIAVSQLRMRQKRTAAGEKIVFKMWLFPGLTYAVMVFIVGTLTIMLFQ 424
           +++GAIALLVYLVIAVSQLRMR +    G  +  KMWLFP LT+ V+  IV  L  MLF 
Sbjct: 367 STTGAIALLVYLVIAVSQLRMRARAEREGRPLELKMWLFPWLTWLVIGTIVMVLGYMLFS 426

Query: 425 EAHRIEIIATGVLSLLVVAAGL 446
           +A+R E + T  ++  ++   L
Sbjct: 427 DAYRYETLMTAGVTAFILLVSL 448